Helicobacter pylori OK113: HPOK113_0351
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Entry
HPOK113_0351 CDS
T02510
Symbol
sfhB
Name
(GenBank) putative pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpyo
Helicobacter pylori OK113
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyo03009
]
HPOK113_0351 (sfhB)
Enzymes [BR:
hpyo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPOK113_0351 (sfhB)
Ribosome biogenesis [BR:
hpyo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOK113_0351 (sfhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAM96259
LinkDB
All DBs
Position
complement(356952..357833)
Genome browser
AA seq
293 aa
AA seq
DB search
MPFVEEEFEILKPIKALFFVCDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQMIQGVVSLI
HFRPNEKTQALVFETKDFGVFDKPPQVYTHPKGYFYHESLLDCIQSHFGKNAHPAHRLDY
ETSGLVLAGKILQSAKDLKALFMQKKVKKTYFALAHGLVDKSIVIDKPILTPQNIQKDLR
IRSKISPLGKPSTTLVEPLSYNPFLDISLLKITPLTGRTHQIRLHLSSVNHRIVGEGLYG
VIDENAREYLQLKRENNTPLLMLHASSLEFEFKGAIYEITSPMPKRFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccattaaagccttgttttttgtg
tgcgatgttttaaaatgctctttaaaagaagcccagcgccaccttgacaaacaacgcctg
aaacaaaaccaacaagccgtgcgtaaatctcaaatgattcaaggggtcgtcagcttgatt
catttcaggcctaatgaaaaaactcaagcgcttgtttttgaaacgaaagattttggcgtg
tttgacaaaccccctcaagtctatacccaccctaaaggctatttttatcatgaaagctta
ctggattgtatccagtcgcattttggcaaaaacgcccacccagcccacagactggactat
gaaacgagcgggttagttttagcgggtaaaatcctacaaagcgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttattttgcgctagcgcatgggttggttgat
aaaagtatcgtcatagacaaacccattctaacgccacaaaacattcaaaaagatttgcgt
attagatctaaaatttctcctttaggcaagccttcaaccacgcttgttgagcctttaagc
tataatccttttttggatataagcttgctcaaaatcaccccactcaccgggcgcacgcac
cagatccgcttgcatttaagcagtgtgaatcacaggatcgtgggcgaggggctttatgga
gtcatagatgaaaacgctagagaataccttcaattaaagcgtgaaaacaacaccccatta
ctcatgctccatgcctctagtttggaatttgaatttaagggagcgatctatgaaatcacc
tcccccatgccaaaacgcttcatgccgtttctaaaggattga
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