Helicobacter pylori 52: HPKB_1353
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Entry
HPKB_1353 CDS
T01898
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpz
Helicobacter pylori 52
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpz03016
]
HPKB_1353 (trmE)
Transfer RNA biogenesis [BR:
hpz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPKB_1353 (trmE)
Prokaryotic type
Methyltransferases
HPKB_1353 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
ABC_tran
cobW
Ras
MMR_HSR1_Xtn
ATP_bind_1
Arf
AAA_29
ATP-synt_ab_N
Roc
iSTAND
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
ACX99892
LinkDB
All DBs
Position
1398955..1400307
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPLGKGAISVIKISGNNALNILKQLTQKQDFTPRYAYVRDIFSNGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPS
DFLDEVSLNLEKQIASFKDLLDFSNTQKQRNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESTDKIERLGIEKSLKSLENCDIVLGVF
DLSKPLEQEDFNLIDTLNRTKKPCIVVLNKNDLVPKLELEILKSYLKIPYSLLETNTLNS
KACLKDLSQKISTFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKDHLETLELFSYHLL
SAIENLNSLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgctgctatcgctacccctttaggcaagggagcgattagcgttatt
aaaatcagcggcaataacgctctaaacatcctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcgcgatattttttctaatggtgttttattagacaaagcg
ttagtgatttatttcaaagccccttatagtttcactggtgaagatgtgtgcgaaatccaa
tgccatggaaacccccttttagcgcaaaatatcttacaagcttgtttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccagacagcttaagggcgagttaaaaatttttattgaagaggccaggaataatctt
ttaaagcttttagccagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttagatgaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagactta
ttggatttttctaatacgcaaaaacaaaggaataaggggcatgccttaagcattgttggc
aaacccaatgccggcaaaagttccctattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacactatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagcacggacaaaatagaacga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacatcgttttaggcgtgttt
gatctttctaaacccctagaacaagaagattttaaccttattgacaccctcaatcgcacc
aaaaagccttgcattgttgttttgaataaaaacgatttagtgcccaagctggagcttgaa
atcttaaaatcttatcttaaaatcccttattctttactagagaccaacaccctaaattcc
aaggcttgtctgaaagatttgagccaaaaaatcagcacctttttccccaaactagacact
caaaacaagctcttgctcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaagaccatttagaaactttagagcttttttcttatcatctttta
agcgcgatagaaaacttgaactcgctcacccgcccttatgaaaccagccaaatgctagac
agcatgtttagcgaattttgcttgggcaaatga
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