Herbaspirillum rubrisubalbicans: Hrubri_3588
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Entry
Hrubri_3588 CDS
T04238
Symbol
rsuA
Name
(GenBank) 16S rRNA uridine-516 pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrb03009
]
Hrubri_3588 (rsuA)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Hrubri_3588 (rsuA)
Ribosome biogenesis [BR:
hrb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Hrubri_3588 (rsuA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALU90745
UniProt:
A0A0U3LEP2
LinkDB
All DBs
Position
complement(4223261..4224943)
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AA seq
560 aa
AA seq
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MESVPVAPAAKPKRAAKPKVAAAPEAAAPAPAPVAPELPKVIVTVGEEVVAPPVLLDAPV
DPNRAKPARRGVRGPRALRNNRAAQRAAAGGAEAAPAQGKGEGDAVPAERHQPRGQFGKN
NAHAGQAGQQGKKNFDKNGKKPKAPQLGLRANEPVDDIFSYVTSEAYDRDEGAKAGGRQA
HQMRGKNGRRDLTAEDDAPKLHKVLADAGLGSRRDMEELIVAGRVSVNGEPAHIGQRILP
TDAVRINGKLIQRKVSKRPPRVLVYHKPAGEIVSHSDPEGRSSVFDRLPTMKAGKWLAVG
RLDFNTEGLLLFTTSGDLANRLMHPRYNIEREYAVRTLGELEEGMRQKLLAGVELDDGPA
QFSRIADGGGEGVNKWYRVTIGEGRNREVRRMFEAVGLTVSRLIRTRYGAMTLPQTLKRG
RWEELEENAVRNLMAACGLEKQAGEAKSGNGGHAGKGQGNGNGNGPRGNAMQNKGPQKGR
NGGNFGNQGGGNYGNGGNYGGGNKGGQPKSRQPDPLQTALGFPDIGNGQRRGNRPQRGGN
TAANFMLGGLPGMNRRRGGR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtgcctgtcgcacctgcggccaagcccaagcgcgcggctaagcccaaggtt
gccgccgcacctgaagcggcagcaccagcgccggccccggtcgcgcccgaactgcccaag
gtcatcgtcaccgtgggcgaggaagtggtggcgccgcccgtgctgctggacgcgccggtc
gatcccaatcgcgccaagccagcccgccgcggggtgcgtggtccgcgcgcactgcgcaac
aaccgcgctgcgcaacgcgctgcggccggtggtgccgaagccgctcccgcccagggcaag
ggggagggcgatgccgtccccgccgagcgccaccagccgcgcggccagttcggcaagaac
aatgcacatgccggccaggctggccagcaaggcaagaagaatttcgacaagaacggcaag
aagcccaaggcgccgcaactgggcctgcgcgcgaacgagccggtcgatgacatcttttcc
tacgtgacttccgaagcctacgaccgcgacgaaggtgccaaggccggtggccgccaggcg
caccagatgcgcggcaagaatggccgccgcgatctcaccgccgaggacgatgcccccaaa
ctgcacaaggtgctggccgacgccggtctgggttcgcgccgcgacatggaagagctgatc
gtggctggccgcgtctcggtcaatggcgagccggctcacatcggccagcgcatcctgccc
accgacgccgtgcgcatcaatggcaagctgatccagcgcaaggtgagcaagcgcccgccg
cgcgtgctggtctatcacaagcccgcgggcgagatcgtcagccattccgatccagaaggc
cgcagctccgtgttcgaccgcctgccgaccatgaaggccggcaagtggctggcggtgggt
cgcctggacttcaataccgaaggcctgctgctctttaccacctccggtgacctggccaac
cgcctgatgcacccgcgctacaacatcgagcgtgaatacgccgtgcggaccctgggcgag
ctggaagaggggatgcgccagaagctgttggcgggcgtggagctcgatgacggcccggcg
cagttctcgcgcatcgccgatggtggtggtgaaggcgtcaacaagtggtatcgcgtgacc
atcggcgaaggccgcaaccgcgaagtgcgccgcatgttcgaagcggtcggcctgacagtt
tcgcgcctgatccgtacccgctacggcgccatgaccctgccgcagaccttgaagcgtggt
cgttgggaagagctggaagaaaacgccgtgcgcaacctgatggccgcttgtggcctggaa
aagcaggctggtgaagccaagtccggcaacggcggtcatgccggcaagggccagggcaat
ggtaacggcaatggtccgcgtggcaacgccatgcagaacaaggggccgcagaagggccgc
aatggcggcaacttcggcaaccagggtggtggcaactatggcaatggcggcaactacggt
ggtggcaacaagggtggccagcccaagagccgccagcctgatccgctgcagaccgcgctg
ggcttccccgatatcggcaatggccagcgtcgcggcaatcgcccgcagcgtggtggcaat
actgccgccaacttcatgctgggcggcctgccaggcatgaatcgccggcgcggcggtcgc
tga
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