Herbaspirillum rubrisubalbicans: Hrubri_3782
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Entry
Hrubri_3782 CDS
T04238
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, dctQ-M fusion permease, large permease component protein
Organism
hrb
Herbaspirillum rubrisubalbicans
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Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ALU90939
UniProt:
A0A0U3L6E6
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Position
complement(4446382..4448265)
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AA seq
627 aa
AA seq
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MMEAAMTYRAPARLHPAARALVGLNRLVMQVVGAVAAGLVLAETVVLLTGVIYRYALHDP
LVWSDELASMLFIWLSMLGAVLALDRGEHMRLTAIINKCSEQGRIWLETVAALVVCIFVL
MVIHPAIDHAVEQMPITTPALEIPDGLRAAALPVGAILMLLAAVSRMAAMTTLRLLLSAL
AVVAVIGAALWLAKPMLLAMGNYNLIVFFVLLIGVCVAAGIPIAFAFGTATMAYLALATT
APLMIVVSRMDEGMSSLILLSVPLFVLLGSLLEQSGLAKTLIDFMAALLGHVRGGLQYVL
LGAMFLVSGISGSKAADMAAIAPALFPEMKKRGSQPEELVALLSSSGAMTETIPPSLVLI
TIGAVCSVSITALFIGGLMPAAIATLAIAVVCWRRARREPMPAVKRAPVSLILKTLIAAI
PALALPMLIRVAVIEGVATATEVATIGVAYTVVVGLVMHLFMRHLDFKRLYPMLIEAAAL
SGAILLIIGMATAMAWALTQSGFSAKLVAIMQGVPGGAAGFLLITIVIFIVLGSLLEGIP
AIVLFGPLLFPVARSLGVHDVHYAMVVILAMGIGLFAPPFGVGFYAACAIGKVSPDGVFN
RVWGYLAALVVALLVVAFVPWISIGFL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagctgcaatgacttatcgcgccccggccaggctgcatccggctgcgcgcgcg
ctggtcggtttgaatcgcctggtcatgcaggtggtgggcgcggtggccgccggcttggtg
ctggccgagaccgtggtgctgctgaccggtgtgatctatcgctacgccttgcatgatccg
ctggtgtggtcggatgaactggcctcgatgctcttcatctggctctccatgctgggcgcg
gtgctggccctggatcgcggcgagcacatgcggctcaccgccatcatcaacaagtgttcc
gagcagggccgcatctggctggagacggtggccgcgctggtggtctgcatcttcgtattg
atggtgatccatccggccattgatcacgcggtggaacagatgcccatcaccaccccggcc
ctggaaatccccgatggcctgcgcgctgcggccttgccggtgggcgccatcctgatgctg
ctggcagcggtctcgcgcatggccgccatgaccacgctgcgcctgctgctctcggcgttg
gcggtggtggccgtgatcggcgcggcactgtggctggccaagccgatgctgctggccatg
ggcaactacaacctgatcgtcttcttcgtgctgttgatcggcgtgtgcgtggccgctggc
attcccattgccttcgccttcggcaccgccaccatggcctatctcgcactggccaccacg
gccccgctgatgatcgtggtcagtcgcatggatgagggcatgtccagcctgatcctgttg
tcggtgccgctgttcgtgctgctgggctcgctgttggaacagtcgggcctggccaagacc
ctgatcgatttcatggcagcgctgctgggccatgtgcgcggtggtctgcaatacgtattg
ctgggggcaatgttcctggtctccggtatttccggttccaaggccgccgacatggccgcc
atcgccccggccttgttccccgagatgaaaaagcgcggctcccagcccgaagaactggtg
gcgctactctcgtcgtcgggcgccatgaccgagaccatcccacccagcctggtattgatc
accatcggcgccgtgtgcagcgtgtcgattacggcgctctttatcggtggcctgatgccg
gccgccattgccaccctcgccattgccgtggtgtgctggaggcgtgcccggcgcgaaccc
atgcccgcagtcaagcgcgcccctgtctctttgatcctcaagaccctgattgctgccatt
cccgcattggcgctacccatgctgatccgcgtggcggtcatcgaaggcgtggccacggcc
accgaagtggccaccatcggcgtggcctatacggtggtggtgggactggtcatgcacctg
ttcatgcggcacctggatttcaaacgtctttatcccatgctcatcgaggcagcggccttg
tcgggcgccatcctgctcatcatcggcatggccaccgccatggcctgggcactgacgcag
tcggggttctcggccaagctggtggcgatcatgcagggcgtgccgggcggtgctgccggt
ttcctgctcattaccatcgtcatcttcatcgtgctgggcagcctgctggaaggcattccc
gccatcgtgctgttcgggccgctgctgttcccggtggcccgttcgctgggcgtgcatgac
gtgcactatgcgatggtggtgatcctggccatgggcatcggcctgtttgcgccgcccttt
ggcgtgggcttctatgccgcttgcgccatcggcaaggtctcgccggacggcgtcttcaac
cgggtctggggctatctggccgcgctggtggtggcgctgttggtggtggccttcgtgcct
tggatttccatcggtttcctctga
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