Herbaspirillum rubrisubalbicans: Hrubri_3795
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Entry
Hrubri_3795 CDS
T04238
Symbol
ispA
Name
(GenBank) geranyltranstransferase (farnesyl-diphosphate synthase) protein
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00900
Terpenoid backbone biosynthesis
hrb01100
Metabolic pathways
hrb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Hrubri_3795 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hrb01006
]
Hrubri_3795 (ispA)
Enzymes [BR:
hrb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Hrubri_3795 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Hrubri_3795 (ispA)
Prenyltransferases [BR:
hrb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Hrubri_3795 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ALU90952
UniProt:
A0A0U3L4Z2
LinkDB
All DBs
Position
complement(4466327..4467274)
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AA seq
315 aa
AA seq
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MNAQMPAASAQASHDFADWMRQVQGGMEDVLDRFLVPTSKVPARLHQAMRYTAMDGGKRV
RPLLVYAAGEVFDTPPALLDRAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDE
ATALLVGDALQAQAFETLSAPLASEPGLSVADLPARQLRMVQLLAQASGSVGMCGGQAID
LASVGMTLSLAELEQMHRLKTGALLRAAVLLGALGGKDLSADESAALDDYACAIGLAFQV
VDDILDATADSATLGKTAGKDAADNKPTYVSILGLAQSQALADKLRATAHAALAPFGQKA
RRLRELADLIVQRKT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacagatgccggcggccagcgcacaggcctcacatgattttgcagactggatg
cgccaagtccagggtggcatggaagacgtgctggaccgcttcctggtaccgacctccaag
gtgccggcgcggctgcaccaggccatgcgctacaccgccatggatggcggcaagcgcgtg
cgcccgttgctggtgtatgccgccggtgaagtcttcgacaccccgcctgcgctgctggac
cgtgctgcggcggccgtggagatgatccacgtctattcgctggtgcatgacgacatgccc
tgcatggatgacgatgccctgcgccgtggcaagcccacggtgcacgtgcaatacgatgaa
gccactgcgctgctggtcggtgacgccttgcaggcgcaagccttcgagaccttgtcggca
ccgctggcatccgagccgggcttgagcgtagccgacctgccggcccgccagttgcgcatg
gtgcaactgctggcccaggcctcgggttcggtgggcatgtgcggcggccaggcaatcgac
ctggccagcgtgggcatgacactgtcgctggccgaactggaacagatgcatcgcttgaag
accggtgcgctgctgcgcgccgcagtgctgttgggcgcgctgggtggcaaggacttgagc
gccgatgaaagtgctgcgctggacgactatgcatgcgccatcggcctggccttccaggtg
gtggacgacattctcgatgccactgccgactcggccacgctgggcaagaccgccggcaag
gatgcggccgacaacaagccgacctatgtatcgatcctgggcctggcccaatcgcaggcg
ctggccgacaagctgcgcgccactgcccatgcggcgctggcaccattcggccaaaaggcg
cgccgcctgcgcgaactggccgacctgatcgtacagagaaagacctaa
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