Helobdella robusta: HELRODRAFT_186265
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Entry
HELRODRAFT_186265 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
hro
Helobdella robusta
Pathway
hro03022
Basal transcription factors
hro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HELRODRAFT_186265
09124 Replication and repair
03420 Nucleotide excision repair
HELRODRAFT_186265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_186265
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_186265
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HELRODRAFT_186265
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HELRODRAFT_186265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
TRAF3_RING
zf-RING_5
zf-RING_UBOX
zf-P11
zf-C3HC4
DUF4105
zf-C3HC4_2
RED_C
Motif
Other DBs
NCBI-GeneID:
20210508
NCBI-ProteinID:
XP_009010772
JGI:
Helro1_186265
UniProt:
T1FNW1
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MEDLCCPRCKSTKYKNPNLKLMVNVCGHSLCEKCVELLFVRGSGKCETCQIPLRRNNFRI
QVFESPEVERDIDIRKKVLKDYNKKEKDFSTLREYNDYLEEVETIVFNLTYGIDVEQTRQ
KMEQYKQANQDNIKRNRLKISQEEEELLRLIEEEAMEHEIALQRQVQDDLCEKDQKQKLK
DNIINDLMFSKLPASHILETHKKDAEKIKNGGPEKTSKFSSGIPIGKQEVQNVSAVSEQV
YNYKYQPLHFDNKGPDLPSIDQLENLNYLVNVRECTRTEVAGGFVSEIPCHRALQDAYAG
LFIFMDQSSVSIKS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttgtgttgtcccagatgcaaaagtacaaaatataaaaatccaaatttaaag
cttatggtaaatgtctgtggtcactcgctatgtgaaaagtgtgtcgagttgttgtttgtt
cgaggctctggaaagtgtgagacatgtcagatcccactgaggagaaataatttcagaatt
caggtatttgaatcacctgaagtcgagagagacatagatattcgtaaaaaagttttgaaa
gattacaacaaaaaagagaaggatttttctacattgcgagaatacaacgattatctagaa
gaagtcgaaactatagtcttcaacttaacgtatgggatcgacgtcgagcagacgagacag
aagatggagcagtacaagcaggccaaccaggataacatcaagaggaaccgattaaaaatt
agccaagaggaagaggagttactgaggttgatagaggaggaagccatggagcacgagatc
gcgctacagcggcaggtacaggatgatctgtgcgagaaagaccagaagcaaaagctgaaa
gacaacatcatcaatgatctgatgttctccaagctgcctgccagccacatactggagacc
cataagaaggatgcggagaagattaaaaacggtggaccagagaagaccagcaaattctcc
agtggcataccaattggtaagcaggaagttcagaacgtatcagcggtgtcggaacaagtc
tacaactacaagtaccaacctttgcactttgataacaagggccctgatctgcctagcatc
gaccaactcgaaaatctcaattacctggtcaacgtgcgggaatgtacgcggacagaggtg
gccggcgggttcgtctccgaaattccttgccatcgagccctgcaagatgcctacgccgga
cttttcattttcatggaccaatcttctgtctcaatcaaatcttaa
DBGET
integrated database retrieval system
