Helobdella robusta: HELRODRAFT_192304
Help
Entry
HELRODRAFT_192304 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K16175
protein scribble
Organism
hro
Helobdella robusta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_4
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
20212230
NCBI-ProteinID:
XP_009020590
JGI:
Helro1_192304
UniProt:
T1FTT3
LinkDB
All DBs
Position
Unknown
AA seq
1856 aa
AA seq
DB search
MFHCIPFIKSCNRHVEYLDKRHCNLQSVPDEVLRHTRTLEELLLDSNQLSELPRNLTYLC
LNDISLNRLPCDIGSLVNLENLELRENFIKYLPSSMSLLKKLRILDLGNNLIEELPNVLG
SLLNLEELLLDCNELSEIPPDIGKLKKLTQLDISENKIEVLPDGIGGLVNIIDLYLSRNL
LEYLPDTIDSLGRLCILKVDQNQLVKLTPHIGMCHSLQELILTENLLADLPGELGQLQRL
TNLNLDRNRLSSVPGELGQCGSLGVLSLRDNRLVDIPEAIGNLKNLHVLDVAGNRLHHLP
LSLGSCNLKAIWLSENQTHPMLHFQEDEDAENVGKRILTCFLLPQLAYQSENSERDGWSI
EQQQQHQQLLLQQQQQLSSSILLQQQQHQQQQQNHVTSIAFVGVDDYNSDAEQDEIPFKR
QNTPHPKELRTRHVNKLTKKEHYQAMENVHDQIKDSIDSESHKLSSKKSSQDDDDDDVGD
IHGDDDETAKLMSSSADRKSVISSPPLSYYSPASDKNVKPPPTTITFLPAVKFLVQPSSS
KLSSPRSTSSSSPTAQQLQSPPLATTTTSTNIATSSSSPSSSSLSRKTKDLNIDSKGNPS
AKNSKRDADNDDNDGHHDDDDDDEEDADDDLKRLSSSSSSPVILRKNKPRFSGVGNDEDD
DNNDDDNERQSNAERHVGFASSVDEFRAKEGKLRRRDTPHHLKNKRIVTNKMNPEEKLCQ
ILAQSSLDSHKYSVSSSEDISCRLAYDRMSDFHNDKDNDDKVKKQIKFCSSSNEDNEDAD
DDDGDEHGDDNDDGARDNTHSKMRRHLHIYDSDIRNEGGGDADNGSFHHSTTASPKMTSS
KVTSPEMASPATSTTTSKANKTVHETITTTTTATTSANNNNKSGIGDNKDDDVDDGGVEM
VFRISKEDGVGLGMNVAGGLGSSPFRGNDKVNERNVINVPHAYAVNLLKEAREQVVVVIY
RENDVKNNSTSVPTIANNNHHMTTTSFIVTDSLGVAERRSSSSGCGGGDGCGGVADVSTE
AVVATLYRKEPHSCLGFKLTDNHDKKGVYISDIVEGGVAILDGRLKIHDRIMSINGCDVS
GKSLPDVVEIVSKFNNKLTIVAYRHKLIPVSSTSSLTASSTSTLASTTIATTAQTSSTLA
PTETTTTSRLFQTTFAVPVATTASATTVSTAATPTAAISSSLSTNSSISATSQPQKLAEI
DDAIAKFTSRRPTQTTSTSSSITSTTTTPSSPTSQMMSTTKTSTAKPLTSSTATSSLSVP
TSPTSKTSPPASSSSSLSSACFLANLNLSLSYYSRCTLVASPTFSNSSGNNISTTAPYNI
SNNINKFEYQLSSKTHNAINNVISDVNVSHINNIINNINNNINNNITVPIFLCLCPYKLL
LSTSIVIEEDLSRGYFSMGSRGDTSDSCGYNSHVYRDDADCNNDKVDDEWMIKSGEVKKD
DDNNDGDDGIDGIKAFDGNNIAPYPIEVVHLNKGLGPLGLSIVGGRDQTNHPFGEFCGDG
NSDDEDFGVFISRVSAGGVASNSSLKIGDRILSVNNVNLMNVTHAEAVKHLSSAVGVVKL
VVRKDPQPLNLQEVTLVKEEHDEKLGISIRGGHRSKSGNPANPKDEGIFISKIHNPGLAY
RDGRLKVGQRILEVNHQSILGLTHQESVSALKSPHSDSLTLVVCSGFDPDLLSTTNLSSS
NSSSADLLVKPDITATTATDVAATTFSCSDVFLYCDDLTLNKINLQQQSQRHQLQQQQQQ
QQSKSSSSFDRNEEDDPANEFMSFTAKKLFFEKEIQNSKPTFHQKLSISNKISPEDMKSP
ECKVFITPPPPPKKTTTSYSAAANEASSAAAAAAASTTKSSSTSFSQRSPQSRPIH
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgtttcactgcataccgtttataaaatcgtgcaaccggcacgtggaatatttggacaag
aggcattgtaacttacaatcggtgcctgacgaagttctccggcacactcgtacccttgag
gaactcctcctcgattccaaccaactctccgaactgcctaggaatctgacctacctatgc
ctcaatgacatatcactgaacagactgccatgtgatattggaagtttggtgaacttggag
aaccttgaactgagagagaacttcattaaataccttccatcgtctatgtctctattgaag
aaattaagaatactagatctgggaaataacctcattgaagaacttcccaatgttctagga
tcattattgaatcttgaagagctactacttgattgtaatgaactgtctgagataccgcct
gacatagggaagttgaagaaactaacccaactagacatatcagagaacaagatagaagtt
cttccggacggaattggcggattggttaacatcatcgatctctatctctccaggaatctc
ctggaatatctgcccgacactattgattcactgggtagattgtgcatcttgaaagttgac
cagaatcagctggtcaagctgacacctcatatcggaatgtgccattcattacaagaattg
atactaaccgagaatttactggcggatttgccgggagagcttggtcagttacagaggctg
acaaatttgaatttggatagaaatagattgtcctcagtacctggagaactgggtcagtgc
ggttctctcggcgtgctatcgttgcgagacaacagactggtcgatataccagaggctata
ggcaatctcaaaaatctacacgtactcgatgtcgccggaaatagacttcaccatcttcca
ttgagtttgggctcttgcaacttgaaagccatttggctgtccgaaaatcagactcatccg
atgttacattttcaggaagatgaggatgctgagaacgttggaaaaaggattttaacctgt
ttcctgctgccacaacttgcttaccagtccgaaaattcggaacgagacggctggagcatt
gagcagcagcaacaacatcaacaactgttactacaacaacaacaacaattgtcgtcatca
atattgttgcagcagcaacaacaccaacaacagcaacaaaatcatgttacatccattgcg
tttgttggtgttgatgattataactcagatgctgaacaagatgagattccatttaagcga
caaaacacgccacacccaaaagaactgcgaacaagacacgttaacaagttaaccaaaaag
gagcactaccaggctatggaaaatgtacatgatcaaattaaagattcaatagattcagag
agccataaactgagttccaagaaatctagtcaggatgacgatgacgatgacgtgggtgac
atccatggtgacgatgacgaaactgccaagctcatgtcttcatctgccgataggaaatca
gtcatttcgtcgccccccctgtcctattactcaccggcgagcgataagaacgtaaaacca
ccaccgaccacgataacatttctaccagctgtcaaatttctcgtccaaccgtcatcatca
aaactatcatcacctcgatcgacatcgtcatcatcaccgactgctcagcaactacaatca
ccaccactcgcaacaacaacaacatcaacaaacatcgcaacatcgtcgtcgtcgccgtcg
tcatcgtccctttctagaaagacgaaagatctaaatatagatagcaagggcaaccccagt
gctaaaaatagcaaacgcgatgctgataacgatgataacgacggtcatcatgatgatgat
gacgatgatgaagaggatgctgatgatgatctgaagagattgtcatcgtcgtcatcatca
cctgtcattttgaggaaaaataaacctagattctccggagttggcaatgatgaggacgat
gataataacgatgacgacaacgaaaggcagtccaatgccgaaaggcacgttggtttcgca
tccagtgtcgatgagtttagagctaaggaaggcaagctgagaagaagagacactccccat
catctgaaaaataaaaggatcgttactaataaaatgaatccggaagagaaattatgtcag
atcttagcacagagttccctggactcacataagtactcagtttcaagctctgaggatatc
tcatgcagactggcctatgataggatgagtgatttccataatgataaagataacgacgac
aaggttaagaaacaaatcaaattctgctcttcgagtaacgaagataatgaagatgcggac
gacgacgatggcgacgaacatggtgatgataatgatgatggcgctcgtgataacactcat
tccaagatgaggagacacttgcatatttacgacagtgacatcaggaatgagggtggaggt
gacgctgataacggaagttttcatcattcgaccaccgcatcaccgaaaatgacatcatca
aaagtgacatcaccagaaatggcatcaccagcaacatcaactacgacttctaaagccaac
aagaccgtccatgagaccatcacgacgacgacaacagccacgacatctgctaacaacaac
aacaaatctggaattggtgataataaagatgatgatgtcgatgatggtggagtagaaatg
gtgtttaggatcagtaaggaagatggagttggtctcgggatgaatgtcgctggcggcctg
ggctcttcaccattcagaggcaacgacaaagtgaatgagcgtaacgtaatcaacgtacca
catgcctacgccgtcaatctactaaaagaggccagagagcaagtggtcgtcgtcatctat
agagaaaatgacgtcaagaacaactccacttctgttcctacaatcgccaacaacaatcat
catatgaccactacatcgtttatcgttactgatagcctaggtgtggctgaaagaagaagt
agtagtagtggttgtggcggtggtgatgggtgtggcggcgttgcggatgtgtcgactgaa
gccgttgtggccactctctataggaaagaacctcattcttgtctcgggttcaagctgact
gataaccatgacaagaagggtgtttacatatctgatatcgttgaagggggcgttgcaatc
cttgatgggcgactgaagattcatgataggattatgtcgattaatggatgtgacgtgagc
gggaagagtttgccggatgtagttgagatcgtctccaagttcaacaacaaactgaccatc
gttgcgtatcgccacaaattaattccggtttcatccacatcgtctttaacggcatcatca
acatcaacattagcatcgacaacgatagctacaacagcacaaacatcatcaacattagcg
cctactgaaacaacaacaacgtcacgtttatttcagaccacttttgcagttccagttgct
accacagcgtcggcaaccacagtatccactgctgcgacacctacagcagctatttcgtca
tcactttcaacaaactcatccatatcagcaactagtcagccacaaaaattagcggagatt
gatgacgcaattgcaaaatttacttcaagaagaccaactcaaacgacatcaacaagcagt
tccatcacttctacaacgacaacaccatcgtcaccgacatcccagatgatgtcaacaact
aagacatcaacagcaaaaccactaacatcatcaacagcaacatcatcattaagtgttcct
acatcgccaacatcaaaaacatcaccaccagcttcatcatcatcttcattatcatcagca
tgtttccttgctaacttaaacctctctttgtcttattacagccgctgcactcttgtcgct
agtccgacattcagcaacagcagcggcaacaacatttccacaacagcgccatacaacatc
agcaacaacatcaacaagtttgaatatcaactcagcagcaaaacccataacgccatcaac
aacgtcatcagtgacgtcaacgtcagtcacatcaacaacatcatcaacaacatcaacaac
aacatcaacaacaacatcaccgtccctatcttcttgtgcctttgtccatataagttacta
ctaagcaccagcatagtaattgaggaagatttgagtcgcggctacttcagtatgggcagt
cgtggcgacactagcgacagttgcggctataacagccacgtttatcgcgatgatgccgat
tgtaataatgataaagtagatgatgaatggatgattaaatctggagaagttaagaaggat
gatgataacaacgatggcgatgatggtattgatggtattaaagcatttgatggtaacaac
atagctccttatccaattgaggtggtgcacctgaacaagggcttaggccctttggggtta
agcattgtgggtggtcgtgatcaaactaatcacccttttggtgaattctgtggggacggt
aattctgatgatgaagattttggcgttttcatatctcgggtatcagccggtggtgtggcc
tcgaatagctctctaaagatcggtgatcgaatcctttctgtgaacaacgtaaacctaatg
aacgtaacacacgctgaagcagttaaacacctgtcatcagcggttggcgttgttaagctg
gtcgttcgcaaggacccacagccattaaatctccaggaagtaacattagtgaaagaagag
catgatgagaagttgggaataagtatcagaggtggtcacagaagtaagtcaggcaatcct
gctaatcctaaagatgaagggatatttatctctaagatacacaatcctggcctggcttac
agagacgggcggctgaaagttggacagagaatattagaggtaaaccatcagagcattctc
ggcctcacccatcaagaatctgtgtcagcactaaagagccctcatagtgacagcctcact
ctggtcgtctgctctggattcgatcccgacctccttagcactacaaacctttcgtcgtcc
aactcttcatctgctgatctgttggtgaaacctgacattactgctactactgctactgat
gttgccgcgactaccttttcatgttccgatgttttcctctattgcgatgaccttacgtta
aataagataaatctacaacaacaatcacagcgacatcaactacagcagcagcagcaacaa
cagcagtctaaatcttcttctagttttgatcggaatgaggaggatgatcctgccaatgag
tttatgagctttactgccaagaagctatttttcgagaaagagatacagaactctaagcca
actttccaccagaaattatcaatatctaataagatttcaccagaagacatgaaatcacca
gaatgcaaggtgttcatcacaccacctccaccaccgaagaaaacgacgacatcgtattca
gctgctgccaacgaagcttcttctgctgctgcggctgctgctgcttctaccactaaatcg
tcgtcgacgtcgttttctcaacggtcgccacaatcgcgacctatccattaa
DBGET
integrated database retrieval system