Helobdella robusta: HELRODRAFT_68586
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Entry
HELRODRAFT_68586 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hro
Helobdella robusta
Pathway
hro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HELRODRAFT_68586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_68586
03009 Ribosome biogenesis [BR:
hro03009
]
HELRODRAFT_68586
03036 Chromosome and associated proteins [BR:
hro03036
]
HELRODRAFT_68586
Enzymes [BR:
hro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HELRODRAFT_68586
Messenger RNA biogenesis [BR:
hro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HELRODRAFT_68586
Ribosome biogenesis [BR:
hro03009
]
Eukaryotic type
90S particles
RNase
HELRODRAFT_68586
Prokaryotic type
rRNA processing factors
HELRODRAFT_68586
Chromosome and associated proteins [BR:
hro03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HELRODRAFT_68586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
Motif
Other DBs
NCBI-GeneID:
20214220
NCBI-ProteinID:
XP_009027181
JGI:
Helro1_68586
UniProt:
T1FZH2
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MSDWVRCSPADLYFKRNSENDMVESTKRMQDLEQKFENVLLKRAKLIRAHRLPVSMPERF
FKKYGAKKSCTLESDEEDDEDNDDADDDIKSKVNIIEWKNKHPEKLHDELWFNLPGEMND
GPLCRCKEKTKLHGIRHDIYPGEQNIKKCQPHSNNNGDLYHYKISMSPHTNFLTRNPSVI
NYDSHEYIFEGFSLFSHYKISKVPTCKVIRFNIEYTIHWFEEDMIENFDVKSLDLFSDFL
YGEILELIDLDWLNKNYESSCRCFHLMPRFSRELPDNGKEILSMNEVLTFLLKSNKPLVD
DIQIGEMLSTTDQEWQDFVDEVRGMIVTYPGMRPSSLRVDQLDRTQENNDVIRFPKIIHF
GYRPAQLSYVGDVVYSKLFKQYMKLKYLVANKPKLSIKDRDKLRTLENQLQEIRMKGSLK
REMTVEISSEGFMRTGLKSDICQHALLIPVLLQHLRFHKCLDVLEKNIGYFFKNRLLLQM
AMTHPSFRMNYGTNPDHARNSLTNCGMRQLEYGDRHIHYIHTRKRGIKTLMHIMSKMARS
KETDSEIHHYERLEFLGDTVIEFLSSIHLFFLFPRLEEGGLATYRAALVQNQHLTVLAQK
LGLQHFLLYAHGPDLCRDLDLRYALANCFEALMGSLYLDGGIEVADRIFGEALFKGEPNL
LHVWTNLPAHPLQIDEPLGDRHWVEKSKPLQKIVEFERIIGFRFNHIRLLARALTMRNIG
FNNLTL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattgggtaaggtgctcaccagctgacctgtatttcaaacgaaactctgagaat
gatatggttgagagcaccaaacgaatgcaagatttagagcagaaattcgaaaatgttctt
ttaaagagagctaagttaatcagagcacacagattaccggtttctatgcctgaaagattt
tttaaaaaatatggagcaaaaaaaagttgtacattggaaagtgatgaagaagatgatgaa
gataatgacgatgcagatgatgatattaaaagtaaagttaatattattgaatggaaaaac
aaacaccccgaaaaattgcatgatgaattatggttcaatcttccaggagaaatgaatgac
ggtccgttatgtcgatgtaaagaaaaaacaaaacttcacggtattcgacacgacatttat
cctggagaacagaatataaaaaagtgtcaacctcactcaaacaataatggagatctctac
cactacaaaatctcaatgtctcctcacacaaattttttgactcgcaacccatcagtcatc
aattatgatagtcacgaatatatttttgagggattttctctgttctcccactacaaaatc
tcaaaggtgcccacatgtaaagtcattcgattcaatattgaatatacaattcattggttt
gaagaagatatgattgaaaattttgatgtcaaaagtttagatcttttcagtgatttctta
tacggagagatattggaattaattgatttagattggttaaacaaaaactatgaatcctct
tgcagatgttttcatttaatgccaagattctccagagagctcccggacaatggcaaagaa
attttgtctatgaacgaagttttgacttttttgttaaaaagtaacaaacctttggttgat
gatattcaaattggagaaatgttgtctacaaccgatcaagaatggcaagattttgtcgat
gaagtgcgaggaatgattgtcacgtatcctggaatgagaccgtcttcattgagagttgat
caattagatcggacacaagaaaacaacgacgttattagattcccaaaaatcattcatttt
ggttatagacctgctcaattaagctacgtaggagatgtcgtttacagcaagttattcaaa
cagtacatgaagttgaaatatttggtagcaaacaagcctaaattatctataaaagacaga
gacaagttaaggacgttagaaaatcaattacaagaaatcagaatgaaaggatctctaaaa
agagagatgaccgttgaaataagcagcgaaggatttatgaggactggcctaaagtctgac
atttgccagcacgctcttcttatacccgttttgttgcaacacttgcgattccacaaatgc
ttggatgtcttggaaaaaaacatcggttattttttcaaaaacaggctattgttacaaatg
gcaatgactcatccttcatttaggatgaattatggaactaatcctgatcatgcacgtaat
tcattgacaaactgtggcatgaggcagttagaatatggagataggcacattcattatatt
cataccagaaaaagaggcataaaaaccttaatgcacatcatgtctaagatggctcgttct
aaagaaacggactctgaaattcatcattatgaaagactcgagttcctaggagacactgtt
attgaatttctttcaagtattcacttgttttttctttttcctcgtttggaggaaggggga
cttgcaacttatcgggctgctcttgttcaaaaccaacatctaactgtacttgcgcaaaaa
cttggcctgcagcatttcttattatacgcccatggcccagatttgtgcagagatcttgat
cttagatacgctttggccaactgtttcgaagctcttatgggatcattatatttagatgga
ggaatcgaagtagctgatcgaatttttggggaagctctttttaaaggagaacctaatttg
ttacatgtttggaccaacttacctgcacatcctttacaaattgatgagcctctcggtgac
agacactgggtagaaaaaagcaagccgcttcagaaaatagtcgagtttgaaagaatcatt
ggcttccggtttaatcatattcgattattagcacgagccctcaccatgagaaacattggt
ttcaataaccttactctgtaa
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