Helobdella robusta: HELRODRAFT_69385
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Entry
HELRODRAFT_69385 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
hro04137
Mitophagy - animal
hro04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HELRODRAFT_69385
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
HELRODRAFT_69385
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
HELRODRAFT_69385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_69385
Enzymes [BR:
hro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HELRODRAFT_69385
Ubiquitin system [BR:
hro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
HELRODRAFT_69385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
20214342
NCBI-ProteinID:
XP_009028819
JGI:
Helro1_69385
UniProt:
T1FZU4
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
LSSGNSSNDLASLFECPVCFDYALPPIMQCQSGHIVCSHCRPKLQFCPTCRGALGNIRNL
AMEKVASQVLFPCRYMSNGCEASLPHTDKANHEDGCEFRPYNCPCPGASCKWQGSLEQVM
PHLLQQHKSITTLQGEDIVFLATDINLPGAVDWVMMQTCFGHHFMLVLEKQEKSEGNQLF
YTIVQLIGTRKQAESFAYRLELNGQKRRLTWEATPRSIHDGVQSAINSSDCLVFDTNVAR
LFADNGNLSINVTINTC
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ctttcaagtggtaacagttcaaatgatttggcttcactattcgagtgcccggtatgtttc
gactacgccctgccacctatcatgcagtgtcagagcggccacatagtctgttcccactgt
cgacctaaactgcaattttgccccacctgtagaggagctttaggtaacataagaaactta
gcgatggaaaaagttgcgagtcaagtcttgtttccgtgtcgctacatgtcgaatggttgc
gaggcttctctaccacatacagataaggctaatcacgaggatggatgcgaatttaggccg
tacaattgcccttgccccggagcctcctgtaaatggcagggcagtctcgaacaggtcatg
ccacatctactacaacagcacaaaagtataacgacgctacaaggcgaggacatagtattt
ttagctaccgacatcaacctacccggggctgttgactgggtcatgatgcagacctgcttc
ggccatcattttatgcttgttttagagaaacaagaaaagtctgaaggcaatcagcttttt
tatacaattgtacaattaattgggacaaggaaacaagctgaaagttttgcttataggtta
gaattaaacgggcagaaacgtcggttaacgtgggaggccacgccccgatccatccacgac
ggggtccagtctgccatcaacagtagcgactgtttagttttcgacacaaacgttgctagg
ctcttcgctgacaatggaaacctaagcatcaatgtcactataaacacgtgttaa
DBGET
integrated database retrieval system
