Hirundo rustica (Barn swallow): 120748877
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Entry
120748877 CDS
T09369
Symbol
PDSS1
Name
(RefSeq) LOW QUALITY PROTEIN: all trans-polyprenyl-diphosphate synthase PDSS1
KO
K12504
decaprenyl-diphosphate synthase subunit 1 [EC:
2.5.1.91
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120748877 (PDSS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hrt01006
]
120748877 (PDSS1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
120748877 (PDSS1)
Prenyltransferases [BR:
hrt01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120748877 (PDSS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
120748877
NCBI-ProteinID:
XP_039911713
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All DBs
Position
1:139898837..139921959
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AA seq
464 aa
AA seq
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MSSSLASQSHLRTRPEVSRPXRGRGGARPAPXRRAAAARGFRVRVAAVPGGGAGAAGLGD
TMALRWWWRRSGAWCCRAPPLGSVPSPGPRAPPAPSAAMCHITQRSSTFSFPKICSMFWR
FHHTSSSHWCSCSKTISDEKYQDPFQLGKKDLKNLYEDIKKELLVSAAELKEMCDYYFDG
KGKAFRPMIVVLMARACNIHHNNSKEVQASQRSVAIIAEMIHTASLVHDDVIDDANSRRG
KRTLNRIWGERKAVLAGDFILSAASVALARIGNTTIISVLTQVIEDLVRGEFLQLGSKEN
ENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLD
FTSCADHLGKPTAADLKLGLATGPVLFACRQFPEMNAMIMRRFSKPGDVERARKYVLQSD
GVQQTTYLAQRYCHAATREIRKLRPSPEREALVHLTEMVLMRDK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgagcctcgcctcccagagtcacctacgcacccggcctgaggtctcccgcccc
ngaagagggcgtgggggtgcccgcccggctcccntccggagggcggcggcggcgcggggc
ttccgcgtccgggtcgcggcggtgccgggaggcggtgccggcgcggcggggctgggggac
accatggccttgcggtggtggtggcggcggagcggcgcctggtgctgccgggctccgccg
ctgggctccgtgccgagccccggcccccgcgccccgccggcccccagcgcggcgatgtgt
cacattacccaaagaagttcaactttctcatttccaaaaatatgtagcatgttttggcgg
tttcatcatacgagttcatcccactggtgcagctgcagtaagacaattagtgatgaaaaa
taccaagacccttttcaacttggtaaaaaagacttgaagaatctctatgaagatattaaa
aaggaattgctggtctctgcagcagaacttaaggaaatgtgtgattattattttgatggg
aagggaaaggcctttcgaccaatgattgtggtgctgatggctcgggcttgcaacattcac
cataataattccaaggaggtgcaagcaagccagcgctctgtggccataattgctgagatg
atccatacagccagtctagttcatgatgatgttattgatgatgcaaattctcgcagagga
aaaaggacgcttaatcgaatctggggagagaggaaagctgttttagctggtgacttcatc
ctctcagctgcttctgtagctttagcacgaattggaaatactactatcatctctgttcta
actcaggtgattgaagatctggtgcgtggtgaattcctccagctgggttccaaggaaaac
gagaatgagagatttgctcactacctcgagaagacttttaagaagacggcgagtctgata
gcaaacagttgtaaagcagtttcaattctaggctgccctgatcccaaagttcatgagatt
gcataccagtatggaaaaaatgttggcatagcttttcagctgatagatgatgtgctggat
tttacatcatgtgctgaccatctagggaaaccaacagcagcagatctcaagcttggatta
gccacaggccctgtcttgtttgcctgtcgacagtttccagaaatgaatgctatgataatg
aggagattcagtaagccaggagatgttgaacgtgcacggaaatatgtgttgcagagtgat
ggtgtgcagcaaacgacctacctcgcccagcgctactgccacgccgccacgcgcgagatc
cgcaagctgcggccgtcccccgagagagaggccctcgtgcacctgacagaaatggttctc
atgcgagacaagtga
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