Hirundo rustica (Barn swallow): 120748893
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Entry
120748893 CDS
T09369
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hrt00535
]
120748893 (NYX)
Proteoglycans [BR:
hrt00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
120748893 (NYX)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
LRR_6
LRRCT_2
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
120748893
NCBI-ProteinID:
XP_039911766
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Position
2:111901424..111911311
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AA seq
498 aa
AA seq
DB search
MTEDETHLCSSCVLLEPSSLLARPEMPLENNQVILWVPQVHGVWVCVRSCPPSCVCTPER
SCSVLCDRAGLGQIPSEFPCEASSINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFIT
PGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVRLDLADCNLFNIPDRIFIELPALQ
ELFCFQNNFRRIPGAIRGMENLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIH
ERAFQGCQRMEYLYLNDNLIGELPENSFDGLRHLKMLNLGGNFLRNISNTWFRDLGELEF
LYLDRNRISYIEEGAFENLTSLVALHLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDC
RIEWLKEWMENYRLVRDIPCASPSSVAGIDLTDVLFERSPEGYCLDPVELNVTSEGPTPS
EEPWSTTESKFNSLISKLLLQMGLPEEVANATEVYSNTTQPDGQTEGVSSGTGEDRTEAD
SSSLCLPALFTVIVLLCK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggatgaaacccatctctgttcttcctgtgtgcttttagagccctcaagtttg
cttgctagacctgaaatgccactggagaataatcaagtgatcctttgggtcccacaggtc
cacggggtgtgggtctgcgtgcgctcctgccctcccagctgcgtgtgcaccccggagagg
agctgctccgtgctctgtgaccgtgccgggctggggcagatccccagcgagttcccctgc
gaagcctcttccatcaacctggataaaaacagcatcaagttcctgtctgagagggccttt
gggacgctgccctctctcaagtccctgtcgctcaaccacaacaacatctccttcatcacg
ccgggggcgttcaaggggctgcccagcctgacggagctgaagatggcccacaacgagtac
attcgctatctccacactcggaccttcaccgcgctccggcgcctcgtgaggctggacctg
gccgactgcaacctcttcaacatcccagacaggatcttcatcgagctgcccgctctgcag
gagctgttctgcttccagaacaacttccgaaggatcccaggcgccatcaggggcatggag
aacttgacccacgtgtacctggagcgaaacaggatcgaagctgtggcctacaactccctg
cagggcctgaccaagctgaaatacctgaatctgcaggacaacaagataaatgtcatccac
gagcgagcttttcagggctgtcagaggatggagtacctgtacctgaacgacaacttgatc
ggtgagctcccagaaaactcctttgatgggctgaggcacctgaagatgctcaaccttggg
gggaattttctcaggaacatttccaacacctggttccgggacttgggggagctggagttc
ctctacctggaccgcaacaggatcagctacatcgaggaaggggcttttgagaacctcacc
agcctggtggctctgcacttgaacagcaacaacctgacgacgctgcccttctccgtgttc
gagcccgtgtacttcctggggcgcctgtacctcttccgcaacccctgggagtgcgactgc
cgcatcgagtggctcaaggagtggatggagaactacaggctggtcagggatattccgtgt
gcctccccctcctccgtggctgggattgatctgacggacgtgctcttcgagaggtctccc
gagggttactgcctcgacccggtggagctgaatgtcacctccgaggggccgacgccgagc
gaggagccttggtctacgacagagagcaagttcaacagccttatctccaaactcttgctc
cagatgggccttcccgaagaggtggcaaacgccaccgaggtgtacagtaacaccacgcag
ccggacggacagactgaaggggtttcctccggcacgggggaggacagaaccgaggctgac
tcctcttccttgtgcctcccagcacttttcacagtgattgttctgctgtgcaaatag
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