Hirundo rustica (Barn swallow): 120760642
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Entry
120760642 CDS
T09369
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03030
DNA replication
hrt03410
Base excision repair
hrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120760642 (POLE)
03410 Base excision repair
120760642 (POLE)
03420 Nucleotide excision repair
120760642 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrt03032
]
120760642 (POLE)
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120760642 (POLE)
Enzymes [BR:
hrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120760642 (POLE)
DNA replication proteins [BR:
hrt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
120760642 (POLE)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
120760642 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
120760642
NCBI-ProteinID:
XP_039937053
LinkDB
All DBs
Position
17:13825472..13860262
Genome browser
AA seq
2292 aa
AA seq
DB search
MGLRDGAEPEAARRGRWPGGPREPVDGAGSGRDDAPALSALKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEIS
PAVRKNREQDQANDVYTTMLSSALTGGSLSTEEEGASKKIANQMDNIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEKEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPANRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
REEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQIKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEG
KKQVLASLPVEGTPCSQVGDIEDFGAVKIPQPLVPIANKRKCIPAAEESQQLSQDVGLSQ
SWREILGPPPPLGTTKEERLVWLRFHQKKWELQARQRQERWKRRRLEDGGAVTGGGVVRD
ALSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRIPKPEDGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALTHLGCVCMVSRQLVQHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYL
YHSSQGGKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSVERTALLEKVGKELLPPD
KHTFEVRAETDPKAIYRGVQRLLLGYKDERRGPTLVAVQSNWDLKLLVSGIPIMEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMNISFDVIQQASLEDMVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSH
CWEFLLWMDPANYGGIKGKVDSRIHYGEKATSKKQALEEEESEEEDVVREEEEEEGEQPD
VEELLENNWNIVQFLPEAGSCQSYFLMIVSAYIVAVYHSMKEELRRNTPGSTPIKRRNTS
QVSQEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLP
GSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSY
VLPEVICRNCNFCRDLDLCKDPALSQVLPGWLCPNCHVQYDTDAIEMALVEALQKKLMAF
VLQDLVCKKCHGVKEAHMPVHCSCAGDFALTISSQAFMDHVSVFQNIARHYGMAYLLETI
EWLLHTNLQLQQ
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggacggcgccgagcccgaggcagcgcggcgggggcggtggccaggtggg
ccacgagagccggtggacggtgcggggtccggccgtgacgatgcccccgcgctgtctgca
ctcaagcgcctggagcgggcacagcgcacggatcggctggacgcgctgttcggcttcgag
cggcccgcggagcccggtgagcggacgggctggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcggtcagtgagcgcagtggactactacttcattcaggaggatggg
agccgcttcaaggtggccctaccctacaagccctatttctacattgctacccagaagggc
tgcgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gaaactgttcccaaagaggacttggatctgccaaaccacttggtgggcctgaagaggaac
tacatcaagctgtccttcaacacggtggaggacttggtgaaggtgcgaaaggagatctct
cctgctgtgaggaaaaatagggagcaggaccaggcgaatgatgtctacacaaccatgctg
tcgagtgctctgactgggggcagtctaagcacagaagaggaaggagcctccaaaaaaatt
gccaaccagatggacaacattgtggatatgcgggagtatgatgtgccctaccacgttcgc
ctttccattgacctgaagatccatgtggctcactggtacaacgtgcgataccggggcaac
acttacccccctgaaatcacccgccgagatgaccttgtggagcggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactcccactgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
attgtctcagagaacattgaagactttgagtttactcccaagccagagtatgaaggtcca
ttttgtgtctttaacgaaccagatgaggctcatttaatccagaggtggtttgaacacgtc
caggagaccaaacccaccatcattgtcacatacaatggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gatagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtc
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttatgatccagtggagctggaccctgaggagatgtgccggatggccacagaggaa
cctcagaccctggccacttactcagtgtctgatgccgttgctacttactacatgtatatg
aagtacgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtgttaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctaccat
gccaacatcatcttccccaacaagcaagagcaggaattcaacaaacttacagaagatgga
catgtgctggactcggagacctacgtgggaggacacgtggaagcactggaatctggggtc
ttccgcagtgacattccctgccgcttcaagatgaatcctgctgccttcgacttcctggtg
cagcatgtggagaagaccctgcagcacgccattgagaaagaggagggtctgcccttggat
caggtcaccaactttcaggaggtttgtgatgaaatcaaggccaaactgaattctctgaag
gatgttcccaacagaattgagtgtcctcttatctaccatctggatgtgggggccatgtac
cccaacatcatcctgaccaacaggttgcagccctcagccatggtggatgaggccacgtgt
gccgcctgtgacttcaacaagccgggtgccaactgtcagcgccggatgacgtggcagtgg
agaggagagttcatgcctgccaaccgcagcgagtaccaccgcatccagcagcagctggag
tcagagaagttccctcccttgttccctgatggaccaccccgtgccttccatgaactctct
cgggaggaacaagccaagtatgagaaaaagcgtttggcagattactgccgcaaggcatac
aagaagatccatgtcaccaaggtggaggagcgagtcaccaccatctgccaacgagaaaac
tctttctacgtggacacagtgcgagcattccgggaccgccgatatgagttcaaggggctg
cacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtg
aaacgctgcaagaacatggagattctctatgactccctgcagctggcccacaagtgcatc
ctcaactccttctacggatatgtcatgcggaaaggagctcgctggtactccatggaaatg
gctggcattgtctgcttcacgggggcaaatatcatcacccaggccagagagctgatcgag
cagattgggagacctctagaactggatacagatgggatttggtgtgtccttcccaacagc
tttccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaggtgaccatctct
tacccaggtgccatgctgaacatcctagtgaaggaaggcttcacaaatgaccagtaccag
gaactgcaggatccagcctcgctcacctacatcacacgctcagagaacagcatctttttt
gaagtggatggtccatacctggccatgatccttccggcctccaaagaggagggcaagaag
ctgaagaaaaggtatgccgtgttcaacgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgttcgaa
gcctttctgaaaggcagcaccctggaggaggtctatgcttctgtggccaaagtggctgat
tactggctggacgtgctctacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaacaggtccatgtcacgcaaactggaggactacggggagcagaagtcc
acctccattagcactgccaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttccaagaaaccagaagggtctccggtcacagag
agggccatcccccttgccatcttccaagccgagcccagtgtgcgcaaacactacctccga
aaatggctgaagagcccctcactgcaggacttcaacatccgtgcgatcctggactgggac
tactacatcgagagactgggcagcaccatccagaaaatcatcaccattcctgcagccctg
cagcagattaagaacccagtgccgcgggtccgacatccggactggcttcacaagaaactc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctctttgtttcagaaggc
aagaaacaggttcttgccagcctacctgtggaggggacaccctgctcacaggtgggtgac
atagaggactttggggctgtcaagatccctcagccactggttcccatcgcaaataagcgg
aagtgcatccctgcagcagaggaaagccaacagctgtcccaggacgtggggctgtcccag
tcctggcgggagatcctgggcccacctccaccccttggtaccacaaaggaagagcgtctg
gtctggctgcgcttccaccagaagaaatgggagctgcaggctcggcagcggcaggagcgg
tggaagaggcggcgtttggaggatggtggggcggtgacaggaggaggggtggtccgcgat
gccctctccaaagggctgagcagctacctgcgccggacagcacgcagcatcctggacttg
ccctggcaggtcgtgcagattgctgagaccagccagcctgggctgttccggctgtgggca
gtgatagggagcgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgcatcccaaagcctgaggatggaacagcctacaggaaggtaaacaggatcctgccc
cgctcaaacttagtttacaacttgtacgaatactctgttcctgaggacatgtaccaagag
cacatcaatgaaatcaacgctgacctctctgctccggacatcgagggagtgtatgagaca
caggtgccactgctcttccgtgccctgacccacctgggctgcgtgtgcatggtcagcagg
cagctcgtccagcacctggcagggcgagaggctgaaaccttcaacatcgagcacctggag
atgcgctcactggcccagtttacttacctggagccaggaagcattcgccacatctacctg
taccacagctcccagggcggcaaggcactcctgggcctcttcatcccctcacagcgcaag
gctgctgtctttgtgctggacaaggtacgcagcaaccagatgccaaacctcaccaccttg
ttctcagtggagcgcacggctctgctggaaaaggtgggcaaggagctattgcccccagac
aagcacaccttcgaggtgcgtgctgagaccgaccccaaggccatctacagaggtgtccag
cggctgctcttgggctacaaggatgagcgccggggccccacgttggtggctgtgcaatcc
aactgggacctgaaactgctggtcagtgggatccctatcatggaggagttccccttggtc
cccatccggctggtagatgacatcagctactcagtcctggactggcagcgccatgccgcc
cgccgcatgattcgccattacctcaacttggacacctgcctctcacaggcttttgagatg
agcaggtactaccacatccccattggaaacctccctgatgacatctccacctttggctct
gacctgttcttctctcgccaccttcgtcgtcacaaccacctgttgtggctgtcccccaca
gcccgccccgacttgggggggaaggaggccgatgacaaccgcctggtcatggagtttgat
gagagagcctcagttgagatcaacaaccctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaacacagtgttgcagtcccaccacgtgaatgacatggaa
ggaggctccagcatgaacattagcttcgatgtgattcagcaggcatccctggaggacatg
gtgacagggaaccaagctgccaacatcccagccagctatgatgagactgccctctgctcc
aacactttcaggattctgaagagcatggtggtgagctgggtgaaggagattacgcagtac
cacaacgtttatgcagacaatcaggttattcacttttaccgctggctccgctctccttcc
tccctgctctatgatccggcactgcaccgcacgctccacaacatgatgaagaagcttttc
ctgcagctggtggccgagttcaagcgcctgggctcctctgtggtctatgccaacttcaac
cgcatcatcctttgcaccaagaagcggcgcattgaggatgccatcagctacatggagtac
atcatcaacagcatccactccaaggagatcttccactctctgaccatctcgttctcccac
tgctgggagttcctgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcatccactatggagagaaggccaccagcaagaagcaggcattggaggaggag
gagagcgaggaagaggacgtggtgagggaagaagaggaggaggaaggggagcagccagat
gtggaggagttgctggagaacaactggaatattgtgcagttcctgcctgaggccggctcc
tgccagagctacttcttgatgattgtatcagcctacatcgtggctgtgtaccacagcatg
aaggaggaactgcggcgtaacacccctgggagcacccccattaagaggaggaacaccagc
caggtgtcccaggaggctctgggagagctgagggccatgcctggcatgatcaccttctca
caagattatgtggccaatgagctcacccaaagcttcttcaccatcacccagaagatccag
aagaagatggctggttcccggaatgccacagagccctcagacatgttcccagtcctgcct
ggctcctacctgccgctcaacaacccagctctggagttcatcaaatacgtttgcaaggtc
ctctccctggatgccaacataaccaaccaggtgaacaaactacgccgggacctgctgcgc
cttatcgaggtgggcgagttctcagaagcagcccagtttcgggacccttgccgctcctac
gtgcttcctgaagtcatctgcaggaactgcaacttctgcagggacctggacctgtgcaag
gaccctgccctttcccaggtgctgcctggctggctctgccccaactgccatgtgcagtac
gatactgatgccattgagatggcgctggtggaagccctgcagaagaagctgatggccttt
gtgctgcaggacctggtgtgcaaaaagtgtcatggtgtgaaggaggcacacatgcctgtg
cactgcagctgtgctggagacttcgccctcaccatctcctcccaggccttcatggaccat
gtcagtgtcttccagaacatcgcccggcactatggcatggcctacctgctggaaaccatt
gagtggctgctgcacaccaacctccagctccagcagtga
DBGET
integrated database retrieval system
