Hirundo rustica (Barn swallow): 120761039
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Entry
120761039 CDS
T09369
Symbol
CASKIN2
Name
(RefSeq) LOW QUALITY PROTEIN: caskin-2
KO
K21952
CASK-interacting protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120761039 (CASKIN2)
Membrane trafficking [BR:
hrt04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
120761039 (CASKIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Caskin-Pro-rich
Ank
SAM_1
Ank_4
SAM_2
Ank_5
Caskin-tail
Ank_3
Caskin1-CID
SH3_2
SH3_9
SH3_1
Baseplate_J
Motif
Other DBs
NCBI-GeneID:
120761039
NCBI-ProteinID:
XP_039937811
LinkDB
All DBs
Position
18:4688859..4722439
Genome browser
AA seq
1479 aa
AA seq
DB search
MGREQELIQAVKNGDVPGVQKLVAKIKVSKSKLLGSAKRLNVNYQDADGFSALHHAALGG
SLDLISLLLEAQATVDIKDSNGMRPLHYAAWQGRVEPVRVLLRAAASVNMASLDGQIPLH
LSAQYGHYEVSEMLLQHQSNPCLINKAKKTPLDLACEFGRLKVAQLLLNSHLCVALLEGQ
SKDATDPNYTTPLHLAAKNGHKEIIRQLLKAGIEINKQTKTGTALHEAALYGKTEVVRLL
LEGGVDVNIRNTYNQTALDIVNQFTTSHASKDIKQLLREASGILKVRALKDFWNLHDPTA
LNVRAGDVITVLEQHPDGRWKGHIHDAQKGTDRVGYFPPSIAEVISKRTGMVVPRVAPAQ
QRQGPPGALPAPPGGLQHLPDEGPHPAAPSGPAAFGHLTLTRTAPGPDSSAGDRNSVGSE
GSIGSIRSAGSGQSTEGTNGQSTSILIENARPLPSTGENLQQHLLGSEPHNGTSPAGPQG
LQTPSSCPPGDRVFSHQFLRPEQLLEGKDAEAIYNWLREFQLESYTVNFLNAGYDVPTIS
RMTPEDLTAIGVTKPGHRKKISTEIGQLSIAEWLPNYIPADLMDWLSAIGLPQYHKKLVN
NGYDSITIVTDLTWEDLQEIGINKLGHQKKIMLAVKKLRDLRKSLNQAEATLARRKVPGS
LDIVTIESLENGECQSPHTPKMTTFQDSELSYELQTAMSNSCHDTLGIKSSQGMSRSQES
IGVRSRGSGHSQDNVLSRRLSSPSQESLGSGESSSSSGQSCAPPRSKESPASLPGRPSPE
PYGKLVSPEGLNGFANGSGGSPLKERNLPEGTDQYARPLAQKGSGTPAVTPCTPPQTPSK
GTAPYVFMYPHVSLKSPTAPSVLGAEQPKALAHPYPSISPGQKSSLQTSAQKGFSYLHSQ
CGPTEPPSAAPAAGEQHNGGEGLKHKKRSHSLNRYALSDGEHEEEEEGAPSSTLGSYATL
TRRPGRSQMPRACLQADAKVTRSQSFAIRAKRKGPPPPPPKRLSSVSSALAAEADGEQPP
SPERQPTAPQDVVDAGATPSDASRGRTVKSLAAALEGTPGVSPSKPLLAPKPLHLTQDCL
PRADVGEVSHDGGDASSATLSNGSRDPFESGKPRRRTVSEPSAPMTEVAAQGEQEDACSD
TEEEAKPGVASSSSQNSSSECIPFAEEGNLTIKQRPKPSGHSKADAAMPDTEPGSQAAEP
QGSTGKEPAAPAVTKEPPVLEFNLTESDTVKRRPRFREREPLQAVLKAFSMAGQAEAGGT
PTPQYAQAQAVSIAGPPAPASAPRPTLAGDAFDDDSVEFRIAEIEKSILSLEKGMKKAPS
PTKAPSPTELVGTAVVRTPTPDVPAKHTSVASTKLVFSGPKTIYQQVLQPSRHTVAPWAA
TEAVPDVIGSLPNPGSLTLETGSKVSAKPLASAPGATLAQQRLEQTNSSLAATLQAAEKK
ITVEEAESHPGTVHSAKNILEDISNMFDDLADQLDAMLD
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgagcaggagctgatccaggctgtgaagaacggagacgtacctggtgtgcag
aagctggtggccaagatcaaggtgtccaagagcaagctcctgggatctgccaagcgcctg
aacgtgaactaccaggatgcggacgggttctcagcactgcaccacgcagccctgggtggc
agcctggacctcatctcgctgctgctggaggcgcaggccactgtcgacatcaaagacagc
aacgggatgcggcccctgcactacgcggcgtggcagggccgcgtggagcccgtgcgggtg
ctgctccgcgccgccgcctccgtcaacatggcctcgctggatgggcagatcccgctgcac
ctctcggctcagtatggccactacgaggtgtcggagatgctgctccagcaccagtccaac
ccgtgcctcatcaacaaggcgaagaaaaccccgctggacttggcctgcgagtttggacgg
ctgaaggtggcccagctgcttctgaacagccatctgtgtgtcgccctgctggagggacaa
tccaaggatgccactgaccccaactacaccactccactgcacctggcagccaagaatggg
cacaaggagatcatcaggcagctgctgaaggccgggatcgagatcaacaagcagacaaag
acaggcacagccctgcatgaggctgcactctacggcaaaacagaggtggtgcggctcctg
ctggagggcggtgtcgacgtgaacatcaggaacacctacaaccagacagcgctggacatc
gtcaaccagttcaccacctcgcacgccagcaaggacatcaagcagctgttgagagaggca
tcaggaatcctgaaggtccgagctttgaaggatttttggaacctccatgacccaactgct
ctcaatgtccgagcaggagacgtcatcacggtcctggagcagcatccagatggccgatgg
aaggggcacatccacgatgctcagaaaggcaccgaccgcgtcgggtacttccccccctcc
attgctgaagtcatcagcaagcggacaggcatggttgttccccgtgtggcacccgcgcag
cagcgccagggtccccctggagccctcccggccccccctggggggctgcagcacctcccc
gatgagggtccacacccggcagccccgagcggcccagcagcctttggtcacctcacccta
acccggacagccccaggtcctgacagctcagcaggagacaggaacagcgtgggcagcgag
ggcagcatcggcagcatccgcagcgccggcagcggccagagcaccgagggcaccaatggg
cagagcaccagcatcctcattgagaatgccaggcctctgccctccaccggtgaaaacctc
cagcaacaccttttgggatcagagccacacaatgggacctccccagcagggccgcagggc
ctccagacccccagcagctgcccccctggagacagggtcttctcccaccagttcttgcgt
cctgagcagctcctcgaggggaaggatgcagaagccatttacaactggctgcgtgagttc
cagctggagtcgtacactgtcaacttcctcaacgctggctacgacgtccccaccatcagc
cgcatgaccccggaggatctgacagccattggcgtgaccaaaccaggccacaggaaaaag
atctccacagaaatcgggcagctcagcattgctgagtggctgcccaactacatcccggct
gacctgatggactggctcagtgccatcgggttgccccagtaccacaaaaagctggtgaac
aacggctacgattccatcaccatcgtgacggacctgacatgggaggatctgcaagagatt
ggcatcaacaagctgggccatcagaagaagatcatgttggctgtcaagaagctcagagac
ctccgcaaaagcctcaaccaagcagaagcaactctggcaagacgcaaagtccccggttcc
ctggacattgtcaccattgagtcgctggagaacggggagtgtcagtccccacacacgccc
aaaatgacaaccttccaggacagcgagctcagctatgagctccagaccgctatgtccaac
agctgccatgacacactcggcatcaagagcagccagggaatgtcacggagccaggagagc
atcggggtacgctcgcggggctcagggcactcgcaggacaatgtgctgtcccggcgcctc
tccagcccctctcaggagagcctgggcagcggcgagagcagcagcagcagtgggcagtcc
tgtgcacccccccgcagcaaggagagcccagccagcctgccaggccggcccagcccggag
ccctatgggaagcttgtgtcccccgaggggctgaacggctttgccaacggcagcgggggc
agccctctcaaggagaggaacctgcccgaaggcacggaccagtacgcccggcccctggct
cagaaaggatccgggactccagcagtcactccctgtactcctccccagactcccagcaag
ggaacagccccctacgtcttcatgtacccacacgtctccctgaaatccccaacggccccg
tccgtcctgggagcagagcagcccaaggccctggcacacccgtacccctccatctcccct
ggacagaagagcagcctgcagacatcagcccagaaaggtttctcctacctgcacagccag
tgcggccccacggagccacccagcgcagcccccgcggccggggagcagcacaacggcggc
gaaggcctcaaacacaagaagcgctcgcacagcctgaaccgctacgcgctgtcggatggg
gagcacgaggaggaagaggagggggcccccagcagcaccctgggttcctacgccacgctg
acgcggcggccgggccgcagccagatgccgcgggcctgtctgcaggccgacgccaaggtg
acccgcagccagtccttcgccatccgggccaagcgcaagggccctccgccgccgcctccc
aagcgcctcagctccgtgtccagtgccctcgctgccgaggcagacggcgagcagcccccc
agccccgagaggcagcccacagcccctcaggacgtggttgatgcgggtgccacccccagt
gatgctagccgtggcagaacagtgaagagcttggcggctgcgctggagggaacgccaggt
gtgagtccgtccaagcccctcctggccccaaaaccgctgcacctgactcaggactgtctc
ccacgggcagatgtgggtgaggtgtcccacgatggcggtgatgccagcagtgccacactt
tctaatggcagcagggacccctttgagagcggcaagccacggagacggacagtgagcgag
cccagtgctcctatgacagaagtggctgcacaaggtgagcaggaggatgcctgctcagac
acagaggaggaggccaagccaggggttgcctcttcatcgtcccagaacagctccagtgag
tgcatcccctttgcagaagaaggcaatttaaccatcaagcagcggccaaagcccagcggg
cattccaaggctgacgcagccatgccggacacggagcctggttcccaggcggcagagccc
cagggctctaccgggaaggagccagcagcccccgctgtgaccaaggagccgcccgtgctc
gagttcaacctcactgagtcagacactgtgaagcgccgaccacgcttcagggagcgggag
ccactgcaggcggtgctgaaggcgttcagcatggcagggcaggcggaggcggggggcacc
cccacaccccagtatgcccaggcccaagccgtgagcatcgcgggtcctcccgccccggca
tcggcaccacggcccacgctggccggggatgcctttgatgatgacagcgtggagttcagg
attgctgagatagagaaaagcatcttgtcgctggaaaaagggatgaagaaggccccaagc
cccaccaaagcccccagccccacagagctggttggcacggctgtggtgaggacacccact
ccagatgtccctgccaagcacacctctgtggcatccaccaagctcgtcttctctggaccc
aagaccatctaccagcaggtgctgcagccctcccgccacactgtcgctccctgggcggcc
actgaggcagtgccagatgtgatcgggtccctgcccaatcccggctcgctgacactggaa
acgggcagcaaggtatcagcaaagcctttggcatctgccccaggggccaccctggcccag
cagcggctggagcagaccaactccagcctggctgccacgctgcaggcagccgagaagaag
atcacagtggaggaggcagagagccaccctgggaccgtgcactcggccaagaacatcttg
gaagacatcagcaacatgtttgacgacctggccgaccagctggatgcaatgctggactga
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