Herbaspirillum seropedicae SmR1: Hsero_2044
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Entry
Hsero_2044 CDS
T01268
Name
(GenBank) outer membrane drug efflux lipoprotein
Organism
hse
Herbaspirillum seropedicae SmR1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADJ63544
UniProt:
D8ISY5
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Position
complement(2308468..2309880)
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AA seq
470 aa
AA seq
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MKSLPMSLPVPFRLSLLLALTLLGACSPLTRSAYTPVSTQTPASWQQRGSQPEADVQRWW
QGFGDATLTALIDEALRKNNDLALAAIKLRRAQAQAGLADDAFVPALSASLGASSSKQLD
GDRISTRASQSSVKLSYEVDLWGRLAAASDLSRWEALATEQDRQSTALTLIGTTANLYWT
GAYLNQRVATAEQSIAYAEKTLELVRTQYQAGAVSSVEVLSAQQNLYSQQSSYTELVQQR
VENDNALAILFDQPPGKAIALPARLPEQALPVLAAGVPAELLGRRPDLRALELRIRSALA
GVDQARLNYYPQLSLTGTLGTSSDALLRLVQNPVATLGGALTLPFLQHSEMKFKVGISQA
DFDTAVLNFRKGLYTAFSEVENALSARQQYARQQALLVRNLDAAQAAERLLEVRYRAGSA
TLQLWLDQQDKRRTAEISLAQVRLNQLKNQMTLYQALGGDASVPAAIIAP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactgcccatgtccctgcccgtcccattccgtctctcgctgctgctcgcgctc
acgctgctgggggcctgcagcccgctcacccgcagcgcctacacacccgtgtccacgcag
acgcccgccagctggcagcagcgcggcagccagcccgaagcggatgtgcagcgctggtgg
caaggctttggcgacgccacgctgaccgcactcatcgatgaagccctgcgcaagaacaat
gacctggccctggcggccatcaagctcaggcgcgcccaggcgcaggctggcctggccgat
gacgctttcgtgccagcgctcagcgccagcctgggagcgagcagcagcaagcagctcgat
ggcgaccgcatcagcacgcgcgccagccagagctcggtcaaactcagttatgaagtggat
ctgtggggccgcctggcagccgcctccgacctcagtcgctgggaagccctggccaccgag
caggatcgccagagcacagcgctcacactcatcggcactaccgccaatctctactggacc
ggggcctacctgaaccagcgcgtggcaacggccgagcagagcatcgcctatgcagaaaag
accctggaactggtgcgcacccaataccaggcaggagcggtgtcgtcggtggaagtgctg
tcggcgcagcagaatctctacagccagcagtcgagctataccgaactggtgcagcaacgg
gtggagaacgacaatgccctggccatcctgttcgaccagccgcccggcaaggccatcgcc
ctgccggcacggctgccggaacaagcgctgcccgtgctggccgctggcgtgccggccgaa
ctgctggggcggcggcccgacctgcgtgcgcttgaattgcgcatccgcagcgccctggcg
ggcgtggaccaggcgcgcctgaattattatccgcaactgagcctgaccggcacgctcggc
accagcagcgacgccctgctgcgcctggtacagaatcccgtggccacgctgggcggcgcg
ctgacgctgcccttcctgcagcacagcgagatgaagttcaaggtcggcatctcccaggcc
gacttcgataccgcggtgctcaacttccgcaagggtctctacaccgccttcagcgaggtc
gagaacgccctgtcggcgcgccagcagtacgcccgccagcaagcgctgctggtgcgcaac
ctggacgccgcgcaggccgccgaacgcttgctggaagtgcgctaccgggccggctcggcc
accttgcagctctggctggaccagcaggacaagcggcgcaccgctgaaatctcgctggcc
caggtgcgcctgaatcagttgaagaaccagatgacgctgtaccaggcgttaggcggagac
gccagcgtgccagcggccatcattgcgccgtga
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