Herbaspirillum seropedicae SmR1: Hsero_2419
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Entry
Hsero_2419 CDS
T01268
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-E factor protein
Organism
hse
Herbaspirillum seropedicae SmR1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
GerE
HTH_23
HTH_38
Phage_antitermQ
Crp
HTH_20
DUF1492
HTH_30
HTH_36
TnsD
DUF134
Motif
Other DBs
NCBI-ProteinID:
ADJ63918
UniProt:
D8IVH9
LinkDB
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Position
complement(2745958..2746518)
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AA seq
186 aa
AA seq
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MHGPSANSIEQEDIDLIERIAQGDRGAFERLYRSYFPRLAQFLRRLVWDGPLSEEIINDT
MFVVWTKAQTYNGQSKVSTWIFAIAYKQGLKALSRVDTPVEMDMETMVSDELVEPEHQLS
ETQLRRHIGGALERLSFEHRTVMTLTYFHGMSYEEIADTMGCSINTVKTRMFYARQKLKV
FLSAYA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcccttcagcaaattccatcgagcaagaagacatcgacctgatcgaacgcatc
gcccaaggggaccggggggcgttcgagcgtctctaccggagctattttccgcggttggcg
cagttcctcaggcggctggtctgggatggtcccctcagcgaggaaatcatcaatgacacc
atgttcgtcgtctggaccaaggcccagacctataacgggcaatccaaggtctcgacctgg
atctttgccatcgcctacaagcaggggctgaaggccttgtccagggtggacacgccagtg
gagatggatatggagaccatggtgtccgacgaactggtggagccggagcaccagttgagc
gaaacgcagctgcgccgtcatatcggcggcgcgctggagcgcttgtcgtttgaacacagg
accgtgatgaccttgacctattttcacggcatgagctacgaggagatcgccgacaccatg
ggctgttcgatcaataccgtaaaaaccagaatgttctatgcgcggcagaagctcaaggtc
ttcctgtcggcgtacgcatag
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integrated database retrieval system
