Herbaspirillum seropedicae SmR1: Hsero_3817
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Entry
Hsero_3817 CDS
T01268
Name
(GenBank) TRAP-type C4-dicarboxylate transport system, dctQ-M fusion permease, large permease component protein
Organism
hse
Herbaspirillum seropedicae SmR1
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Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ADJ65295
UniProt:
D8IRV2
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Position
complement(4370785..4372668)
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AA seq
627 aa
AA seq
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MMEAAMTYRAPVNMNPVARALVALNRMVMHLVGAVAAALVLAETVVLLTGVIYRYALHDP
LVWSDELASILFIWLSMLGAVLALDRGEHMRLTAIINKCSEKGRIWLETVAALVVCIFVL
MVIHPAVDHAVEQMPITTPALEIPDGLRAAALPVGAILMLLAAVSRMAAMTTMRLLLSAL
AVVAVIGGALWLAKPMLLGMGNYNLIVFFVLLIGVCVAGGIPIAFAFGTATMAYLALATT
APLMIVVSRMDEGMSSLILLSVPLFVLLGSLLEMSGLAKTLIDFMAALLGHVRGGLQYVL
LGAMFLVSGISGSKAADMAAIAPALFPEMKKRGSKPEELVALLSSSGAMTETIPPSLVLI
TIGAVCSVSITALFIGGLMPAAIATIAIAVVCWMRARREPMPDVKRAPLSLIVKALIAAI
PALALPMLIRVAVIEGVATATEVATIGVAYTVVVGLIMHLFMRHLSFKRLYPMLIESAAL
SGAILLIIGMATAMAWALTQSGFSAKLVALMQGVPGGGVGFLLITIVIFIVLGSLLEGIP
AIVLFGPLLFPVARSLGVHDVHYAMVVILAMGIGLFAPPFGVGFYAACAIGKVSPDGVFN
RVWGYLAALVVALLVVAFVPWISIGFL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagctgcaatgacttaccgcgccccggtcaacatgaacccggttgcgcgcgcg
ctggtcgccctgaaccgcatggtcatgcacctggtcggcgcggtggccgccgccctggtg
ctggccgagaccgtggtgctgctcactggcgtgatctaccgctacgccctgcacgatccc
ctggtatggtccgatgaactggcctccatcctcttcatctggctctccatgctgggggcg
gtgctggcgctggatcgcggcgagcacatgcggctcaccgccatcatcaacaagtgttcc
gagaaagggcgcatctggctggaaacggtggcagcgctggtggtctgcatcttcgtgctg
atggtgatccatcccgccgtggatcatgcggtggagcagatgcccatcaccacgcccgcc
ctggaaatccccgatggtctgcgcgccgccgccttgccggtgggcgccatcctgatgctg
ctggcggcggtctcgcgcatggccgcgatgacgaccatgcgcctgctgctgtcggccctc
gccgtggtggccgtgatcggcggtgcgctgtggctggccaagcccatgctgctgggcatg
ggcaactacaacctgatcgtcttcttcgtgctgctcatcggcgtgtgcgtggccggtggc
attccgattgcctttgcctttggcaccgccaccatggcctacctggcgctggccaccacg
gcgccgctgatgatcgtggtcagccgcatggatgagggcatgtccagcctgatcctgttg
tcggtgccgctgttcgtgctgctcggttcgctgttggagatgtcgggcctggccaagacc
ctgatcgacttcatggccgcgctgctgggccacgtgcgcggcggtctgcaatacgtgctg
ctgggcgcgatgttcctggtctcgggcatctccggttccaaggcggccgacatggcggcc
attgccccggcgctgttccccgagatgaagaagcgcggctccaagccggaagagctggtg
gcgctgctgtcttcctccggcgccatgaccgagaccattccgcccagcctggtgttgatc
accatcggcgcggtctgcagcgtctcgatcacggcgctgttcatcggcggcctcatgcca
gcggccatcgccaccatcgccattgccgtggtgtgctggatgcgcgcacgccgcgagccg
atgcccgatgtcaagcgcgcgccgctctcgctgatcgtcaaggccctgatcgccgccatt
cccgcgctggcgctgcccatgctgatccgcgtggcggtcatcgaaggcgtggccacggcc
accgaagtggccaccatcggcgtggcctatacggtggtggtcgggctgatcatgcacctg
ttcatgcggcacctgagcttcaagcgcctctaccccatgctcatcgagtcggccgccctg
tcgggcgcgatcctgctcatcatcggcatggccaccgccatggcctgggcgctcacgcag
tcgggcttctcggccaagctggtggcgttgatgcagggcgtgccgggcggtggcgtcggt
ttcctcttgatcaccatcgtcatcttcatcgtgctgggcagcttgctggaaggcattccc
gccatcgtgctgttcgggccgctgctgttcccggtggcgcgttcgctgggcgtgcatgac
gtgcactatgcgatggtggtgatcctggccatgggcatcggcctgtttgcaccgcccttt
ggcgtgggcttctatgccgcctgcgccatcggcaaggtgtcgccggatggtgtcttcaac
cgggtctggggctatctggcggcgctggtggtggcgctcttggtggtggccttcgtgccc
tggatttccatcggtttcctctga
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