Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_0361
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Entry
HLASA_0361 CDS
T04261
Name
(GenBank) ribonuclease R-like protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLASA_0361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsf03019
]
HLASA_0361
03016 Transfer RNA biogenesis [BR:
hsf03016
]
HLASA_0361
Enzymes [BR:
hsf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HLASA_0361
Messenger RNA biogenesis [BR:
hsf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HLASA_0361
Transfer RNA biogenesis [BR:
hsf03016
]
Prokaryotic type
tRNA degradation factors
HLASA_0361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ALG81270
UniProt:
A0A0F7PBX8
LinkDB
All DBs
Position
complement(349259..350536)
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AA seq
425 aa
AA seq
DB search
MTNDAQAEAGTAEAQGPVEVPEDLARQLENKREDLFEKFEISDAFPAEVLEEADEATGDV
AGDIQAEVDERADLREMTTWTTDPVDAQDFDDAISIEEREDEFVLWVHIADVTHYVTPET
AMWDEAIRRGNTVYLPGYTIHMLPPELAETVCSLVPAEDRLAHTVEMHLDKETLSFDTID
IYKSVIESDERLTYSQAEERLDDPEAPLHDDIELVWQLADRMHEIRKEDGSLVLNPRRDR
AHTIIEESMLKANKAVTHELMWSRGVEAVYRVHPQPTPDEWDEALREIQDLEGVSIPGDS
WDDPRKAVNATLEQAPERQLGKIQWAVMKVMPRAKYMNDPFGGHHALNFEIYGHFTSPIR
RMSDLINHWIVYQNDVPENLIELCDRASERQKAGEQAEREYRNFLEEVGLDPDAVNNRGI
EIVED
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgacgcccaggcggaagccgggactgccgaggcccagggaccggtcgaggtc
cccgaggacctcgccaggcaactggagaacaaacgggaggacctcttcgagaagttcgag
ataagcgacgcatttcccgccgaggtcctcgaggaggccgatgaggcgaccggtgacgtc
gcgggcgacattcaggctgaggtggacgaacgggccgacctccgcgagatgacgacctgg
acgaccgacccagtcgacgcccaggacttcgacgacgccatctccatcgaggagcgcgag
gacgaattcgtcctctgggtacatatcgccgacgtcacccactacgtcacgcccgagacc
gcgatgtgggacgaggcgatccgccggggcaacactgtctacctgcccggatacaccatc
cacatgctcccgccggagctggcggagacggtctgttcgctcgtgccggcggaggaccga
ctggcccacaccgtcgagatgcacctcgataaagagacgctctcgttcgacaccatcgac
atctacaagtcggtcatcgaaagcgacgagcggctgacctactcccaggccgaagagcgc
ctggacgatccggaggcccccctgcacgacgatatcgaactcgtctggcaactcgccgac
cgaatgcacgagatccgcaaggaggacgggtcgctcgtgctcaatcctcgccgcgaccgc
gcccacaccatcatcgaggagtcgatgctcaaagccaacaaggcggtcacgcacgaactc
atgtggtcccgcggcgtcgaggccgtctatcgggtgcacccccagccaactcccgacgag
tgggacgaggcactcagggagatccaggacctcgagggagtctccatcccgggcgactcg
tgggacgacccgcgcaaggcggtcaacgcgaccctcgagcaggcgcccgaacgccagctg
ggcaagatccagtgggccgtgatgaaggtgatgccgcgcgcgaagtacatgaacgacccc
ttcggcggccaccacgccctcaacttcgagatctacggccacttcaccagcccgatccgg
cgcatgtccgatctcatcaaccactggatcgtctaccagaacgacgtcccggagaacctc
atcgaactctgcgatcgggcgagcgagcgacagaaagccggagaacaggccgaacgcgag
tatcggaacttcctcgaagaggtgggcctcgacccggacgcggtcaacaaccgaggcatc
gagatcgtcgaggactag
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