Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_1424
Help
Entry
HLASA_1424 CDS
T04261
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsf03016
]
HLASA_1424
Enzymes [BR:
hsf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HLASA_1424
Transfer RNA biogenesis [BR:
hsf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HLASA_1424
Prokaryotic type
tRNA splicing ligases
HLASA_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
ALG82314
UniProt:
A0A0N9MXF6
LinkDB
All DBs
Position
1391537..1394422
Genome browser
AA seq
961 aa
AA seq
DB search
MTTFDADGIELTRIEDNVWEIEAEEEMNVPVRVMASEALLEEIQQDKTLQQIKNVTHLPG
IQSPAVCMPDGHQGYGFPVGGVAATDAENGVISPGGVGYDINCLAGDTDVLLSFGRRRSI
QTLDDGVASESARVISDRPTDADVQLFTESEKPVLELVTEAGTTIEASRDHPFRTPSGMT
EADELERGSIVHVHPFDGLPDEEPPSKTILTKDDFSDEDPQLIAALERRDLLPLSTDDEA
FHRLLKLVGFHTGDGSKSGNQTWFYGDPEDLEEIATDIEAIGFTPSKIYERERTHTIDGN
SFERTEYSVRSTANSFAALLERLGAPTGRKVASDFTVPDYVEDLTDWQKALYLSAFFGAE
MSAPDTVAAMNFYAPSVSHNRLESVEEAGAQFLRELMDLLEDVGIETNELERVERTDRTQ
EVSVRFRFGVSSEARNLIRFFTTVGYRYNAEKQRRGLQAAAYLEKKERAIERRTSIARKA
VTMSDGGTPVSEIASSFDVVNRRFIERSIYDQRVGRPRPSADFPDFEEFVETHPMGSDMT
IPVRIENIRPLGEKSVYDIGVAHEAHNFVANGFVVSNCGVRMVKTNLTYEDVQGHEEELV
NALFDAVPSGLGGGGVVQGTTATIDEILDRGMQWALDNGYAIEDDLEHCEDNGFREEADP
STVSDEAKNRGRKQIGSLGSGNHFLEVQRVTDIYREDVAEAFGLREDQIVVLIHCGSRGL
GHQVCTDYLRRIEQDHSDLLESLPDKELAAAPAGSPLAEDYYGAMNAAINFAWVNRQLVM
HQTRQVFADVFETDWRDLDMYLLYDVAHNIAKKETHTVAGEKKELFVHRKGATRAFPAGH
PEVPEAYRDVGQPVIIPGSMGSGSYVLRGGENSLDRTFGSTAHGAGRLMSRTQAKQEFWG
EDVRDELRDENQIYVKAQSGATIAEEAPGVYKDVDEVVRVSEELGIGDSVARTYPVVNIK
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgactacatttgatgcggacggcatcgagttaacccggatcgaggacaacgtctgggaa
atcgaggccgaggaagaaatgaatgtgcccgtccgcgtgatggcgagcgaggcacttctc
gaggagatccagcaggacaagaccctccagcagatcaaaaacgtcacccatctccccgga
atccagtccccggcggtctgcatgccggacggccaccaggggtacgggttcccggtcgga
ggggtggctgccacagatgccgaaaacggcgtcatcagccctggaggcgtcgggtatgac
atcaattgcctagcgggagatacggacgtcctcctctcgttcgggcgacggcgctccatc
caaacgctcgacgacggagtcgcaagcgagtccgcgcgtgttatctccgaccggcccaca
gacgcggacgttcagctgttcacggagtcggaaaagccggttctggaactcgtaaccgag
gctggaaccacgatcgaggccagtcgggatcacccgttccgaaccccgtctgggatgacg
gaggccgacgaactggaacgaggctcgatcgtccacgttcaccccttcgacggactgccc
gacgaggagccaccgtccaagacgatactcaccaaagacgacttctcggacgaggatccc
cagctgatcgcggcgctcgagcgacgagacctgctcccgctctccacggacgatgaggcg
ttccatcggttgttgaaactcgtgggattccacacgggcgacggttcgaagagcggcaac
cagacgtggttctacggcgaccccgaggacctcgaggagatcgctacagacatcgaggcg
atcggtttcacgccgtcgaagatctacgaacgcgagcggacacacaccatcgatgggaac
tccttcgagcggaccgagtacagcgttcgatcgacggcgaactccttcgcggcgcttctc
gaacggctgggggcgccgacggggcggaaagtcgcctcggattttaccgttccagactac
gtcgaggacctcacggactggcagaaggccctctatctctcggcgttcttcggcgcggag
atgagtgcacccgacaccgtcgcggcaatgaacttctatgccccatcggtctcgcacaac
cggctagaatccgtcgaggaggcaggtgcgcagttcctccgagagttgatggacctcctt
gaggacgttgggatcgaaacgaacgaactcgagcgggtcgaacggacagatcgaacgcag
gaggtgagtgtccgattccgcttcggggtctccagcgaggcgaggaatttgattcggttc
ttcacgacggtcgggtaccggtacaacgccgagaagcagcgtcgtggcctccaggcagcg
gcgtatctcgagaaaaaagagcgagccatcgagcgacggacgtcgatcgcccgcaaggcc
gtcacgatgtcggacggtgggacgcccgtgagcgagattgcgtcctcgttcgacgtggtg
aatcgacgcttcatcgaacggagcatctacgatcaacgtgtgggacggccgaggccctcg
gcggactttcccgacttcgaggagttcgtcgagacacaccccatgggttcggacatgacg
attccggttcgtatcgaaaatattcggccactcggagagaaatcggtgtacgatatcggc
gtggcacacgaggcacacaacttcgtcgcgaacgggttcgtcgtctcgaactgcggcgtc
cgaatggtgaaaacaaacctcacctacgaggacgtacagggccacgaggaggaactcgtg
aacgccctcttcgacgcagttccgtcggggctgggcgggggtggtgtcgtccaggggacg
accgcgaccatcgacgagatcctcgaccggggcatgcaatgggcgctcgacaacgggtac
gccatcgaggacgacctcgaacactgtgaggacaacggcttccgcgaggaggccgacccc
tcgacggtctcagacgaggcgaaaaaccgggggcgcaaacagatcggaagcctgggaagt
ggaaaccacttccttgaggtgcagcgggtcacggacatctatcgcgaggacgtcgccgag
gcgttcggcctcagggaagaccagatcgtcgtcctgattcactgtggttcacggggactc
ggtcaccaggtctgcaccgattacctccgccgtatcgaacaggaccactccgatctgctc
gagtcacttcccgacaaggaactggccgctgcaccggcggggagcccgctggccgaggac
tactacggcgcgatgaacgcggccatcaacttcgcgtgggtgaaccgacagctcgtcatg
catcagacccgtcaggtcttcgccgacgtcttcgagacggactggcgggacctggacatg
tatctgctctacgacgtggctcacaacatcgcgaaaaaggagacgcacacggtggcgggc
gaaaaaaaggaactcttcgtccatcgcaagggcgcgacccgggcgttcccggccggacac
ccggaggtgcccgaggcataccgagacgtcggacagccagtcatcattcccggaagcatg
ggctctggaagctacgttctgcgcggcggggagaactcgctggaccgaacgttcggatcg
accgcgcatggggccgggcggctgatgagccggacgcaggccaaacaggagttctggggc
gaagacgttcgggacgaactccgcgacgagaaccagatctacgtcaaagcacagagcggg
gccaccatcgccgaggaggcccccggcgtgtacaaggacgtcgacgaggtcgtccgggtc
tccgaagaactgggcatcggtgactcggtcgcccgtacctatccggtcgtgaacatcaaa
gggtga
DBGET
integrated database retrieval system
