Halobacillus shinanisalinarum: MUO14_01380
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Entry
MUO14_01380 CDS
T09504
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
hshi
Halobacillus shinanisalinarum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_8
PAS_8
AAA
PAS_10
AAA_2
DapB_N
AAA_5
HTH_50
NAD_binding_7
Mg_chelatase
AAA_16
GFO_IDH_MocA
Glu_dehyd_C
Shikimate_DH
NAD_binding_3
Semialdhyde_dh
DPCD
HTH_30
CoA_binding
AAA_3
GARS_N
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
UOQ93684
LinkDB
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Position
complement(253843..255912)
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AA seq
689 aa
AA seq
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MKRVLIVGAGKGGMALMQLLKETDRMTVVAVTDINPEAEGLRQAVSLGIATGENWRDFIH
NNIDIVIEATGSEQVFEAIRAERSSKTVLIPGDVAYITSELLEEKESLLTELKQQTDNQT
LILNSIHDGMIVIDANEHVSFMNKSGERILRKNRREVIGEHVNKVIPDSRLPRLLSTQRK
EVNQKLQLKNGNKVITTRIPIVGGNKKVIGAYAVFKDITEVVDLAEEITDLKEVKTMLEA
IIQSSDEAISVVDENGNGLMVNPAYTRITGLTEKEIIGRPATVDISEGESMHLKVLKTRR
PVRGVRMKVGPSDKDVLVNVAPVIVDGKLKGSVGVLHDVTEIQSLTSELRRARQIIRSLE
AKYTFDDIIGDSQEMTLPLEQAKVGARTPATVLLRGESGTGKELFAHAIHNESKRKHNKF
IRVNCAAIAETLLESELFGYEDGAFPGAKRNGRKGFFEEANNGSIFLDEIGELSLTMQAK
LLRVLQEKEIVRVGGTKPIHVDVRVIAATNINLEKAIMKKSFREDLYYRLNRLPIYIPPL
RERKEDLKPLTTHLVQKLNEDYGRNVTHIHGLALEKLCEYDWPGNVRELENIIGRAMIYM
ENHQDIIEKKHIPTLLKNETAFSDIQGEESIWLGGTLQEAVDEYEKDLLADAFRSHNFNK
TRTAKALGISIRNLYYKLDKYQLDKDRAK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtgctcattgtcggagctggcaaaggcggtatggccttgatgcagttatta
aaagagacagatcgtatgactgtcgtcgctgttacggatatcaatcctgaagctgaaggg
cttaggcaggctgtatcacttggaattgctactggtgaaaactggcgtgactttatacat
aacaatatagatattgtcatcgaggcaacaggaagtgagcaagtttttgaggctattcgt
gctgaacgttcgagcaaaacggtattgattcccggggacgtcgcctatattacatcagag
ttattggaggagaaggaatccctacttacagagctgaaacagcaaacagataatcaaaca
ttgattttaaatagtattcatgatggtatgatcgtcattgacgcaaatgagcatgtttct
tttatgaataagagcggtgagcggattcttaggaaaaacaggcgtgaggttattggagaa
cacgtaaataaagtaattccagattcaaggctgccgcgtttattatcaacacagcgtaaa
gaggtaaaccaaaaacttcagctcaaaaatgggaataaagtgatcactacaaggattcct
attgtaggaggcaataagaaggtaatcggtgcttatgcggtgtttaaagatattacagaa
gtcgtggatttagcagaagagatcacggatttgaaagaagtaaaaacaatgctcgaagca
ataatacagtcttcagacgaagccatttccgtagtagatgaaaatggaaacggtttaatg
gtaaaccctgcctacactcgaattactggacttaccgaaaaggaaatcatcggaagacct
gcgaccgttgacatttctgaaggagaaagtatgcacttgaaggttcttaaaacacgtcgg
ccagtccgaggtgtccgaatgaaggtagggccttcagataaagatgtgttagtcaatgtg
gctcctgttatcgttgatggaaaactaaagggaagtgttggtgtcctccatgatgtaaca
gaaattcaatccttaacgagtgaattgaggagggcacgacaaataataagaagtctcgag
gcgaaatatacctttgatgatatcatcggtgattcacaggaaatgacattaccccttgag
caagcaaaggtgggggcaagaacaccagcgactgtccttctacggggtgagtcaggtaca
ggtaaagaattatttgcgcacgccattcataatgaaagtaagcggaagcacaataagttt
attcgtgtaaactgtgcagctattgctgaaacgctgcttgagagtgagctttttggttac
gaggacggcgcatttcccggtgcaaaacggaacgggagaaaaggatttttcgaagaagca
aataatggcagtatctttctggatgaaatcggcgaactgagcttaacgatgcaagctaaa
cttcttcgtgttttgcaggaaaaggagattgttcgagtcggagggacgaagccgatccat
gttgatgtacgggtgattgccgctacaaatattaatttagagaaagccattatgaaaaaa
agctttagagaagatctctattatcgtcttaatcgtttacctatttatattccaccgctt
cgggaacgaaaagaggatctcaaaccgcttacaactcatttagttcaaaagttaaatgag
gattatgggagaaatgtaacgcacatacacgggttggcattagaaaagctgtgtgaatat
gattggcccgggaatgtaagagagcttgagaatattattggcagagcaatgatttatatg
gagaaccatcaagacatcattgaaaaaaaacatattcccactctgttaaagaatgaaacg
gctttttcagacatccagggtgaggaatctatttggcttggagggacactgcaggaggca
gtcgatgaatatgagaaggatctgctggcagacgcattccgctcccataattttaataaa
acgagaaccgctaaagctttagggatttcaattcgtaacctttattataagcttgataag
tatcagcttgataaagatagggcaaaataa
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