Halomonas aestuarii: BOX17_01275
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Entry
BOX17_01275 CDS
T04554
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
hsi
Halomonas aestuarii
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsi03021
]
BOX17_01275
Transcription machinery [BR:
hsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BOX17_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_28
Motif
Other DBs
NCBI-ProteinID:
APE29708
UniProt:
A0A1J0VCG7
LinkDB
All DBs
Position
complement(286475..287080)
Genome browser
AA seq
201 aa
AA seq
DB search
MGTRETDQQLVERAQKGDNRAFDLLVKKYQHKIIGLIGRYVHDHAEVQDVAQEAFIKAYR
ALGKFRAESAFYTWMYRIAINTAKNYLVSKGRRPPGSDLDIVDAEIVDHSGRLADSETPE
AAMARDQLEAAIFEAIEALPDDLRTAITLRELDGLSYEDIAAIMQCPVGTVRSRIFRARE
AVDQHIRPLVTTSRNQESVVE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccgggaaaccgaccagcaactcgtcgagcgcgcccagaagggggacaatcgc
gccttcgacctcctggtgaagaagtaccagcacaagatcatcggcctgatcggtcgttac
gtgcacgaccacgccgaggtgcaggacgtggcgcaggaggccttcatcaaggcctaccgg
gcactggggaagtttcgcgccgaaagcgcgttctacacctggatgtaccgcatcgccatc
aacaccgccaagaactacctggtgtccaaggggcgccggccgccggggagcgacctcgac
atcgtcgatgccgagatcgtcgatcacagcggacggctggccgattccgagacgcccgag
gcggccatggcgcgggaccaactggaggccgccatcttcgaagcgatcgaggccctgccc
gacgacctgcgcacggcgatcaccctgcgcgagctcgacgggctctcctacgaggacatc
gcggccatcatgcagtgtcccgtgggcaccgtccgctcgcggatcttccgggcccgcgag
gccgtggaccagcatatccggccgctggtcaccacgtcgcgcaaccaggagtcggtggtc
gaatga
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integrated database retrieval system
