Halomonas aestuarii: BOX17_08675
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Entry
BOX17_08675 CDS
T04554
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hsi
Halomonas aestuarii
Pathway
hsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX17_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsi03019
]
BOX17_08675
03016 Transfer RNA biogenesis [BR:
hsi03016
]
BOX17_08675
Enzymes [BR:
hsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BOX17_08675
Messenger RNA biogenesis [BR:
hsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BOX17_08675
Transfer RNA biogenesis [BR:
hsi03016
]
Prokaryotic type
tRNA degradation factors
BOX17_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
APE31019
UniProt:
A0A1J0VG49
LinkDB
All DBs
Position
1892434..1894626
Genome browser
AA seq
730 aa
AA seq
DB search
MVAESKRPKHRKVTLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDDTVVLC
TVVARKEANPAQPFFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPL
FPKGFMNEVQVVCSVLSTDRNHDPDIAAMLGTSAALAISGVPFNGPIGAARVGFTEENGY
FLNPTVEELGDSELNMVVAGTEKAVLMVESEAKELLEDEMLGGVLYAHQEMQVAIQAINE
LTAEAGKPKWDWQLPAENAALKGAMAEGFEAKVGEAYRITDKMARQDALSALKDQAVEQL
AGEEEGKFDADDVKGAFAGLEKRVVRSRVVKGEPRIDGRDHKTVRPLSIEVGTLPKTHGS
AIFTRGETQAIVVATLGTLRDSQLIESLEGERKDRFLLHYNFPPYSVGEAGFMGGPKRRE
IGHGRLARRGVQAMLPDDADFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPMKAP
VAGIAMGLVKDDDGFAVLTDILGDEDHLGDMDFKVAGSAEGVTALQMDIKIEGINEEIME
IALQQAYDARQQILEQMNAVIAQSRTEVSENAPSMATIKIDPEKIRDVIGKGGATIRKIC
EDTGASIDLDDDGTVRIYAEDKSAAKAAIDTVLAITAEPEIGKLYRGKVVRIADFGAFVN
IMPGTDGLVHISQIVPERVNDVRDFLNEGDEPIVKVLDIDNRNRVKLTIKEITPEEKAAF
EAEEAAEPAL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgagtcaaaacgacccaaacacagaaaagtaacgttgaaggaagtcgccgtg
aatccggtcaagaagacatttcagtacggtcgcagcaccgtcaccctggaaaccgggcgc
atcgcccgccaggccaccggtgccgtgatggtcaccatggacgacaccgtggtgctgtgc
accgtggtggccaggaaggaagccaaccccgcacagcccttcttcccgctctccgtccat
taccaggagaagacctacgcggtcggcaagattcccggcggctttttcaagcgcgagggg
cgtcccaccgaaaaggagactctcacctcgcggctgatcgaccgcccgatccgcccgctc
ttccccaagggcttcatgaacgaggtgcaggtggtctgctcggtgctctccaccgaccgc
aaccatgatccggacatcgcggccatgctcggcacctccgccgccctggcgatctccggc
gtgcccttcaacggcccgatcggcgccgcgcgcgtgggcttcaccgaggagaacggctac
ttcctcaaccccaccgtggaggagctgggcgactccgagctcaacatggtggtcgccggg
accgagaaggcggtcctgatggtcgagtccgaggccaaggagctgctcgaggacgagatg
ctggggggcgtgctctacgcccaccaggagatgcaggtggccatccaggccatcaacgag
ctcaccgccgaggccggcaagccgaagtgggactggcagctgcctgccgagaacgctgcc
ctcaagggcgccatggccgagggcttcgaggcgaaggtcggcgaggcctatcgcatcacc
gacaagatggcccgccaggacgccctgtccgccctcaaggaccaggcggtcgagcagctc
gccggcgaggaagagggcaagttcgacgccgatgacgtcaagggcgcctttgccggcctc
gagaagcgcgtggtgcgttcgcgggtggtcaagggcgagccgcgcatcgacggccgcgac
cacaagaccgtgcgtccgctctccatcgaggtcggcaccctgcccaagacccatggctcg
gcgatcttcacccggggcgagacccaggccatcgtggtggcgaccctgggcaccctgcgc
gactcccagctgatcgagtcgctggagggcgagcgcaaggaccgcttcctgctgcactac
aacttcccgccctacagcgtgggagaggccggcttcatgggcggacccaagcgtcgcgag
atcggccacggccgcctggcgcgccgcggcgtgcaggccatgctgcccgacgatgcggac
ttcccctacaccatccgcgtggtgtccgagatcaccgagtccaacggctcgagctccatg
gcatccgtgtgcggctcgtccttggcgctgatggatgccggcgtgccgatgaaggcgccg
gtggccggcatcgccatgggcctggtcaaggacgatgacggcttcgccgtgctcaccgac
atcctcggtgatgaggatcacctcggcgacatggacttcaaggtggccggcagcgccgag
ggcgtcaccgccctgcagatggacatcaagatcgagggcatcaacgaagagatcatggag
atcgccctgcagcaggcctacgacgcccgccagcagatcctcgagcagatgaacgccgtg
atcgcccagagccgcaccgaggtctccgagaacgcgccctccatggcgaccatcaagatc
gacccggagaagatccgcgacgtcatcggcaagggcggcgccaccatccgcaagatctgc
gaggataccggcgcctccatcgacctggacgacgacggcaccgtgcgcatctacgccgag
gacaagtcggcggccaaggcggccatcgacaccgtgctcgcgatcaccgccgagcccgag
atcggcaagctctatcgcggcaaggtggtgcgcatcgccgacttcggcgccttcgtcaac
atcatgccgggtaccgacggcctggtgcacatctcccagatcgtgccggagcgggtcaac
gacgtgcgggacttcctcaacgagggggacgagcccatcgtcaaggtgctcgacatcgac
aaccgcaaccgggtgaagctcaccatcaaggagattaccccggaagagaaggccgccttc
gaggccgaggaggccgccgagccagcgctgtaa
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