Histophilus somni 2336: HSM_1560
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Entry
HSM_1560 CDS
T00673
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hsm
Histophilus somni 2336
Pathway
hsm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HSM_1560
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsm01007
]
HSM_1560
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsm03016
]
HSM_1560
Enzymes [BR:
hsm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HSM_1560
Amino acid related enzymes [BR:
hsm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HSM_1560
Transfer RNA biogenesis [BR:
hsm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HSM_1560
Prokaryotic type
HSM_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FlgN
CEP63
DUF6674
Filament
DUF3450
Zw10_N
Motif
Other DBs
NCBI-ProteinID:
ACA31319
UniProt:
B0UUT7
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All DBs
Position
1794935..1796224
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AA seq
429 aa
AA seq
DB search
MIDPTLLRNNLSEIAEKLKVRRGFILDVDKFSQLEEQRKTLQIKTETLQAERNSRSKTIG
AAKARGEDISTLLAEVDHMGAELNTVKEELANVLTEIEQLALTIPNIPADEVPLGKDDSD
NKEVFRWGTPKKFDFEVKDHVALGEILGGLDFAAGVKLSGARFAVIKGQIARMHRALAQF
MLDLHTEQHGYTEAYVPYLVNHTTLYGTGQLPKFGEELFHIKPLENEQTYALIPTAEVPV
TNLVRDEIIDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVEPEKSM
EALEELTNQAEKVLQLLNLPYRKVLLCTGDMGFGATKTYDLEVWIPAQNTYREISSCSNM
WDFQARRMQARCRAKGDKKTRLVHTLNGSGLAVGRTLVAILENYQNADGSITVPEVLRPY
MNGIEIIGK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgattgatccaactttattacgcaataatctttctgaaattgcggaaaaattaaaagta
agacgtggctttattctcgacgtagataaattttcacaattagaagaacaacgtaagact
ttacaaattaaaacggaaactttacaagccgaacgtaactctcgctcaaaaacaattggt
gcggcaaaagctagaggagaagatatttctactttattggcagaagttgatcatatggga
gccgaattaaatactgtcaaagaagaattagcgaatgtattaacggaaattgagcaattg
gcattaacaattcccaatattcctgctgatgaagtacctttaggaaaagatgattctgat
aataaagaagtttttcgttggggaacaccaaaaaaatttgatttcgaagtgaaagatcat
gttgccttaggggaaatattaggtgggttagattttgctgctggtgttaaattaagtggt
gctcgttttgccgtaataaaagggcaaattgcaagaatgcatcgagccttggcacagttt
atgctagatttacatactgagcaacatggctatacagaggcttatgtaccttatttagtc
aatcatacaacactttatggaacggggcagttaccaaaatttggtgaggagttatttcat
ataaaacccctagaaaatgaacagacttatgcgttaatccctaccgccgaagtgcctgta
acaaacttagttcgagatgaaatcatcgatgaagctgatttaccaataaaaatgaccgca
catacgccttgtttccgttctgaagcaggttcttacggtcgtgatactcgaggtttaatc
cgtatgcatcaatttgataaggttgaattagtacaaattgttgaaccggaaaaatcaatg
gaagcactggaagaattgacaaatcaggcagaaaaagtattacaacttttaaatttacct
tatcgtaaagttttattgtgtacaggcgacatgggattcggagctactaaaacatatgat
ttggaagtgtggattccggcacaaaatacgtatcgtgagatttcttcttgctcaaatatg
tgggatttccaagcacgtcgtatgcaagcccgttgtcgtgcaaaaggcgataaaaaaaca
cgcttagtacatactttaaatggatcgggactagctgttggccgcactttagttgccatt
cttgaaaattatcaaaatgcagatggctctattaccgtaccggaagtattacgcccttat
atgaatggaatagaaattattggtaaataa
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