Hippoglossus stenolepis (Pacific halibut): 118099190
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Entry
118099190 CDS
T08308
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04510
Focal adhesion
hsp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118099190 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118099190 (lama4)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_EGF
Laminin_I
Laminin_II
Laminin_G_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
118099190
NCBI-ProteinID:
XP_034999448
LinkDB
All DBs
Position
20:complement(1426661..1460112)
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AA seq
1880 aa
AA seq
DB search
MAAKSLSCLCLLCILSVIAYPASAAGLGEQQQLLLKDCAKGFFLSEQNICLPCNCKGHAD
SCEDITGICIDCRDHSTGDFCEMCEDGHMLKPSMDRQHTCRPCACPLSVPSNNFAVRCDR
GSGILRCKCQEGYAGHLCERCAPGYYGNPMEIGNSCKRCDCNGNSDPNLIFNECHNMTGH
CQHCWGNTAGANCERCAPGFYGDAISAKNCRESVCNKCGTSSCDDRTGVCHCKPGVKGRL
CDQCEEGYSGFSSCQGCRRCECGPASIRSTCHPLTHSCPCRPGAGGRYCERCLPGHWDYS
PSGCQKCDCESGHCDMHTGECMSEAATVNLCNINCDECIWHLIGDLRESNKTLDQLKVGV
LNISTGAAANDRLKFYNYTAHRLQAQFQGWRNKSSAMKAQTGELEEATDAVVLEIKQLGE
SESVVMTLGKRLENETLETLTLADQLSTNLTDLNIRIEEMIHDWELYSVQQDVDPEVVRR
NTDKAQLMVTRMRKVDLSPREPVATDESTEAHDLLRRIRQLDKKLMVTEGRLSPVREILS
RFSTKLSDAETSLQKAAGNVQDTEDMNRANVLKFQRSEAKQLLLTEDHTAVNDTLEAAGG
FISDTERTVAEVDAMVQNVTEYHAAIDGASQSLTEKTERLSMADRDLVQRADEHAVELEK
QANELEEDLRASDANGFVQRAISAANVYNNIVKYIDDANITSLTTFNLSQRAEDVVAGIN
TQLGLLVTQSNNVFKESVSLHSEQSEVETEVIDKLKYIEETKETMDKNTKQLADLVQDIG
GIQRDGTAQRLEFTLEVAEGTLNHSAEVLQTITPISSKVEEWAKNMRNNDYSVAAYEEAV
SSAGETVETLNVLVPELLNKLRVVEEKKPVNNVTTNIMRIRELIAQARSVAKKVQVSMKF
NGQSSVEVHPHSNLEELKTVTTISLFIRVDPDKDPIEDRFILYLGDRNGRKDYMGLAIKN
DNLVYVYNLGGEDVEIPLSSKPVSQWPAVFNYIKVERLGRHGKVFLTVPSQSSTDEQKFI
QKGEAPGTDSLFDIDPKDIVFFVGGVPPDVKLPPPLSLAPFVGCIELASLNNDVISLYNF
KEAHKMDVVTSSPCPRYKLAFSQSRIASYLFDGTGYALINNIERRGKFGVVTRFDIAVRT
VANNGVLFVMVNGDNYFLLELKNGFLRLMYDFGFANGPRVLENNLPKLQINDARYHELSI
IYHQSKKVILLVDKSHVKSLENPKTTLPFSDIYIGGAPSSILKSRPELSAGVGLKGCVKG
FQFQKKDFNLLEEPGTIGISSGCPEESFMSHKAYFTGESYLGSTGKISPCDSFEGGLNFR
TLQPSGLLFYHSEGSDEFSISLDNGAVVMNTRGTRVKSHKKQYNDGRTHFLVASVNNQKY
SLLVDDKDKQEKKRPSSATRPSSGSAVKTFYYGGSPSSSFKNFTGCISYAYINRQDRDIE
PEDFQRYTDKVQTSLQDCPVQRPPAALLSRQRENISRAKHGQSQQVTRDKSSLPLGLMEL
KSDDQEPSELNIEPCYLSSSPRASQQAFHYGGIANSRQHFTDLPDSLSERSHFSLSLKTY
SSFGLIFYVSDVQEDNFMALFLAQGKLVYTFNAAEQRVKIKSEEKYNDGAWHNVIFIRDG
RVGRLIIDGLTVLEDRVQESNISWHVNSPLYVGGVPPGRALKNVQRNSAYSFTGCLKNLQ
LDGLWLPSVTETFGVTPCFDGLSEAGTYFSEEGGYIVLDDSFNLGLKFELVMEVRPRVAS
GVLMHLFTDDGFITMYTHQGAVEVLVNDGTHEFSTKVSPRQGLCAGNWHRITVIRDANVV
QLDVDSEISHVVGPLNASSTDTRKPVFIGGAPDLFLPESLPTRKLYIGCMRNLTINNSPV
SLSKAAVVSGAVSVGTCPAA
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaatctctgtcctgcctttgccttctttgcatcctctcagtgattgcctat
ccagcttctgccgccgggctcggggaacagcaacagttactcctgaaagactgtgccaag
ggatttttcctcagtgagcaaaacatatgcttaccatgtaactgtaaaggccatgctgac
tcctgtgaagacatcactggcatttgtatagactgcagggaccacagtacaggcgatttc
tgtgaaatgtgtgaagatggtcacatgctgaagcccagcatggatagacaacacacctgc
cgaccttgcgcctgtcccctctcagtcccctccaacaacttcgcagtgcgctgtgacaga
ggaagtggcattctgcggtgcaagtgccaagagggctacgccggacatttatgtgagagg
tgtgcaccaggttactatggcaaccccatggagattggcaattcctgtaagaggtgcgac
tgcaatgggaattccgaccccaacctgattttcaatgagtgccacaacatgacaggccac
tgccaacactgctggggaaacaccgccggggccaactgtgagaggtgcgctccaggtttc
tacggcgacgccatcagtgccaagaactgcagagagtccgtgtgcaataaatgcggcacc
tcctcatgcgacgacaggacaggagtgtgtcactgcaaaccaggtgtcaagggtcgactc
tgtgaccagtgtgaggagggctactcaggtttctccagctgtcagggctgccggaggtgt
gaatgtgggccagcttccattcgctccacctgccatcctctcacccacagctgtccgtgc
cgcccgggggccggcgggcgttactgcgagcgctgcctcccaggtcactgggactacagc
ccctccggctgccagaagtgcgactgtgagagcggccactgtgatatgcacacgggagag
tgcatgtcagaggctgcaacagtaaacctgtgcaacatcaattgtgatgagtgcatttgg
catctgattggggacttacgtgagtcaaataagacactggatcagctgaaggttggagtg
ttgaacatctccactggagctgctgctaacgacaggctcaaattctacaactacacagca
catcgattgcaggctcagtttcaaggctggagaaacaagtcatctgcaatgaaggcgcag
actggggagctggaggaggccacagacgctgtggtgttagaaatcaaacagctgggagaa
tcggagagtgtggtgatgactttggggaagaggcttgaaaatgaaacgctagagacccta
accctggctgaccagctcagtacaaacctcactgacctcaacattcgcatcgaagagatg
atccacgactgggagctgtacagtgttcagcaggatgtggacccagaggtggtcagacgc
aacacagacaaagcccagttaatggtgaccaggatgaggaaagtggacctgtccccacga
gagcctgttgccactgacgagtccactgaggctcatgacttgctgaggcgtatccgtcag
ttggataagaagctgatggtcacagaaggccgactctcccctgtcagggagatcctgtcc
cgcttctccaccaagctatcagacgctgagacctctctccagaaagcagccggcaacgtg
caggacacggaggacatgaacagagccaacgtcctcaaattccagaggagcgaggccaag
cagctgctgctgacagaggaccacactgctgtcaatgacacactggaagcagccggaggt
ttcatctctgacacagaaaggactgtggctgaggtggatgctatggtgcagaatgtgact
gagtaccacgcagcgatcgatggcgccagccaaagcctgacggagaagacggagcgtctc
tctatggccgacagagatctggttcagagggcagacgagcatgccgtggagctggagaaa
caggccaatgaactggaggaggatctgagagcgagcgatgccaacggctttgtacagaga
gccataagtgctgccaacgtctacaacaacattgtgaaatacattgacgatgcaaacatc
acctcgctcaccaccttcaacttgtcccaaagagctgaagacgtcgtcgcagggatcaac
actcagcttggactccttgtgacacagagcaacaatgttttcaaggaatctgtgtcatta
cactcagaacaatctgaggttgaaactgaggtgattgacaagctgaaatacattgaggag
accaaagagaccatggataagaacaccaaacagcttgcagacctagtgcaggatatcggt
ggaattcagagagacggaacagcacagcgtctggagttcaccctggaggtggccgagggg
acgctcaaccactcagcagaggtccttcaaaccatcacgcccattagcagcaaggttgag
gaatgggccaaaaacatgagaaacaatgattactctgtagctgcttatgaagaggccgtt
tcctctgccggagaaacagtggagaccctgaacgtgctcgtccccgagctgctgaacaaa
ctgagggtggttgaggagaagaagcctgtcaacaacgtgaccaccaacatcatgaggatc
agagagctcatagcccaggccaggagcgtggccaagaaagtccaagtgtccatgaagttc
aacggccagtcctcggtggaggtccaccctcacagtaacctggaagaactgaagacagtg
acaacaatcagcttgttcataagagtggaccctgacaaggatcccattgaggaccgtttc
atcctttacctgggagacagaaatggtaggaaagactacatgggtctggctatcaagaac
gacaacctggtgtacgtgtacaacctcgggggtgaagatgttgagatcccgctgagttca
aagcctgtcagccaatggcctgcagtgttcaactacatcaaagtagagaggctgggcaga
catggaaaggtcttcctgaccgtccccagtcagagctccacagacgagcagaagttcatc
cagaaaggcgaggctccaggcacagactcactgtttgacattgaccccaaggatatagtg
ttctttgttggtggtgtcccaccagatgtcaagcttcctcctcctctgagtctcgctcct
tttgtgggctgcatcgagttggcctcgctcaacaatgatgtgatcagtctgtacaacttc
aaggaggctcacaaaatggatgtggtgacatcatcaccatgccccaggtacaagttggca
ttctcacagagtcgcatcgccagctacctctttgatggaacaggctacgctctcatcaac
aatattgagaggaggggcaaatttggtgtcgttacgagatttgatattgcagtacgaacc
gttgcaaacaatggcgtcctcttcgtcatggtcaatggggacaattacttccttttggaa
ttgaagaatggctttttgcgactaatgtatgacttcggcttcgccaatggaccaagggtt
ttggagaataatttaccaaaactgcaaataaatgacgcacgataccatgagttgtcaatc
atctaccatcagtcaaagaaggtgatcttgctcgtggacaaaagccatgttaaatcgttg
gagaatcccaaaaccacactgcccttctcagatatatacatcggtggggctccatcaagc
atcctcaaatccaggccagagctgtctgctggagtcggccttaaaggctgtgtgaaaggt
ttccagttccagaagaaagacttcaacctgctcgaggagcctggcaccattggcatcagc
agtggctgcccggaggagtcctttatgtcccataaggcctatttcactggagagagctac
ctgggatccacaggaaagatttcaccctgcgacagctttgagggaggactcaacttcaga
actcttcagcccagcggacttctgttctaccacagtgaagggtctgatgagttcagcatc
tccctggacaacggagcagtggtgatgaacaccagaggcacaagagtcaaatcacacaag
aaacaatacaatgatggaaggacacacttcttagtggcctcagtgaacaatcagaagtat
tctctgttggtggatgacaaagacaagcaggagaagaaacgtccatcatcagccacaaga
ccctcatcaggctctgctgtaaagaccttctactacggagggtctccaagcagcagcttc
aagaacttcacaggctgcatcagttatgcttacatcaacagacaagaccgggacattgag
cctgaggacttccagcggtacacagacaaggtgcagacctccctgcaggactgtccagtc
cagcgcccccctgctgctctgctgtcaaggcagagggagaacatctccagggccaaacat
ggccagtcgcagcaggttaccagggataagtccagcctccctctaggcctgatggaactg
aagagtgatgaccaggagccatctgagctgaacattgagccctgctacctctcctcaagt
cccagagcgtctcaacaagccttccactacggtggcatcgccaacagcagacagcacttc
acagatctcccagactccctttcagagaggtcccacttctccttgtccctgaagacttac
tcatcctttgggctcatcttttatgtatctgatgtccaagaggacaatttcatggctctc
ttcttggcccaagggaagctggtatacaccttcaatgcagcagagcagagagtcaaaatc
aagagtgaggagaaatacaatgatggtgcatggcacaatgttatttttatccgtgatggg
agagtggggcgtttaataattgatgggctcacagtcctggaggacagagtacaggaaagc
aacatctcctggcatgtcaacagtcccctctatgtcggaggagttcctcctgggagagct
ctgaagaatgttcagagaaactcggcatacagcttcaccggctgtttgaagaaccttcag
ctggatggactgtggctgccctctgtgaccgagacgtttggggtcactccttgctttgac
ggactctctgaggcaggaacatacttctcagaggaaggaggatacatcgtgctagatgac
tcttttaacctggggctgaagtttgagctggtgatggaggtgcgcccccgtgtggcatct
ggggtgctaatgcatttgttcacagacgatggctttattaccatgtacactcatcaagga
gcagttgaggttcttgtgaacgatggaacccatgagttctccacaaaggtgtctccaaga
caaggtctgtgtgctggcaactggcacagaattacagtgatccgagatgccaatgttgtc
cagctggatgtggactctgagatcagccacgtggtgggacctctgaatgccagctccacg
gacactagaaagccagtgttcataggtggagctccagatctgttccttccagagagcctt
cccaccagaaagctctacatcggctgcatgaggaacctgaccatcaacaacagcccagtg
agcttgagcaaagctgccgtggtcagtggggctgtcagcgtgggaacctgcccggcagca
taa
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