Hippoglossus stenolepis (Pacific halibut): 118123612
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Entry
118123612 CDS
T08308
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118123612 (tsen54)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
118123612 (tsen54)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
DUF4656
Motif
Other DBs
NCBI-GeneID:
118123612
NCBI-ProteinID:
XP_035036997
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Position
16:complement(18902154..18910408)
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AA seq
517 aa
AA seq
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MADHNKPHAEQSLYSEMLSPSELFAARSRSHKIPVRGPKDFFPDGSDEQRQRLDQSLTEH
WSLLSEERVERLGNLVKATWIPDDRIVELQSPAGKFWHTMGFSANGKQCLLPEEALYLME
CGNLQVFYQDLPLSIQDGYERFLSSATVSLRQYQVFGHLKRLGYVVHRFDPSSEPSSYAR
QLNLPQSHDRAGRLLKRKRSFSPSSTPTSSCTDAQENSTDRTERMMEDKGEEDTKLPEST
SQEDMEVQISTATTTNPADEGGGRSWWAADGLRDSARGSNHSATSVPSRWDFSSIPFPDL
GSSEHLSSCLASPDPSLLPGALAVGVCDVAPWKQRINLRKVAMSSNEQRREEDGRRRDVN
KDKDVRQCRNWAEYQELLKRRHERGDGRPAHLWNREVTPLHDPRQPIPTKELLDKISVIE
STDLLEGASRLKGSEDWRICFGVYQPDSVAEFKKNSPGKPYSRMCVCSFDGPVPDLRAIK
LLASQSGDVPVVFAVVDYGDISFYTFKDFQLPTDVYP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacaacaagccccacgctgagcagagtctctacagtgagatgttaagtccg
tctgagctgtttgcagctcggtccaggagtcacaagatcccagtgagaggaccgaaggac
ttcttccctgacggctcagacgagcagagacagcggcttgaccagagtctgaccgagcac
tggagcctcctatcagaggagagagtggagaggctaggaaacttagtgaaggccacatgg
attccagacgaccggattgtggagcttcagtctccagctggaaagttctggcatacgatg
ggattttctgccaatggcaaacagtgtctcctccctgaagaggcgctctacctgatggag
tgtggaaacctgcaggtgttttatcaggatttgccgctgtccattcaggacggttatgag
agatttctgtcctcagccacagtgagcctccgacagtatcaggtgtttgggcatctgaag
aggcttggctatgtggtacacaggtttgatcccagttcggagccatcgtcgtacgcaagg
cagctgaacctgcctcagtcccatgatagagcgggaagactactgaagaggaaacgtagc
ttcagcccctcctccaccccaacatccagttgtactgacgctcaagaaaattccactgat
agaactgagaggatgatggaggataaaggcgaggaggacacaaagcttcccgagtcaacc
tctcaagaggatatggaggtccagatctccaccgcgactaccactaatccagcagacgaa
ggtgggggcaggagctggtgggcagcagatggtctcagggactcggccagaggatcaaat
cacagcgccacctctgttccctcccgctgggacttcagctccatcccgttccctgacctt
ggctccagtgaacatctgtccagctgtctggcatctccagacccctctctgctgcctggg
gctttggctgtgggagtctgtgacgttgccccctggaagcagaggataaacttgcggaag
gtggcgatgtcctcaaatgagcagaggagggaagaagacgggcggcggcgggatgtcaac
aaagacaaagacgtccggcaatgcagaaactgggccgagtatcaggagctcctgaagagg
cgacatgagagaggggacggtcgaccagctcacctgtggaacagagaagtcactcccttg
catgacccaagacaacccatccccaccaaggagctgttggataaaatcagcgtgatcgag
tctacagatttactcgagggggcgtccaggttaaaaggctcagaggactggaggatttgt
ttcggtgtttaccaacctgattcggtggctgagttcaagaagaacagcccggggaaacct
tactcccgcatgtgtgtgtgcagtttcgacggccctgtgcccgacctgcgagctatcaag
ctgctggcctcccagagcggagacgtcccagtggtctttgctgtggtggactacggagac
atctccttctacaccttcaaagacttccagctgccaaccgatgtgtacccctga
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