Harpegnathos saltator (Jerdon's jumping ant): 105186413
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Entry
105186413 CDS
T03918
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03022
Basal transcription factors
hst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105186413
09124 Replication and repair
03420 Nucleotide excision repair
105186413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hst03021
]
105186413
03400 DNA repair and recombination proteins [BR:
hst03400
]
105186413
Enzymes [BR:
hst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105186413
Transcription machinery [BR:
hst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105186413
DNA repair and recombination proteins [BR:
hst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105186413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
Motif
Other DBs
NCBI-GeneID:
105186413
NCBI-ProteinID:
XP_011144889
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MGPPKRFKRDNTKWKKRKDDYDEYNDEDSIDSNEADGVPDAAKNDIEKQDETAIEDEFGA
KDYRLQMILKPDCASRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEYIHEYKL
TAYSLYAAVSVGLQTEDIIEYLKRLSKTSVPDGIIEFIKLCTLSYGKVKLVLKHNKYFIE
SPFPEVLQRLLKDPVIQECRLRKIVEDTEVDDITTNIQTKIKTQFGAKSLANTFAPSKTN
PETPESGQISAETANIPEDITAFYSKIDKEDEDEEEYQELKTVSFEVNQEKIEVIQKRCI
ELEHPLLAEYDFRNDSVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAG
KSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCGI
LVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLG
LTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYREYLAC
KMSKKLLLYVMNPNKFRCCQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTS
QNERIQILQNFKFNMKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILR
AKKGAVAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMDEEPDLMYA
NREEQGQLLQQVLTASDTDADEEKIPGEGPRPIVRKTGTMASMSGADDAIYYEYKKAPSS
STANKHPLFKKFRT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccaaaacgttttaagagagacaatactaaatggaaaaagcgtaaagatgat
tatgatgaatacaatgatgaggattcaatagatagtaatgaagctgatggtgtgccagat
gcagcaaaaaatgatatagaaaagcaagatgagactgcaatcgaagatgagtttggagca
aaagattatcgcttgcaaatgattttaaaaccagattgtgcatctagaccattatgggtt
gcacctaatggacatatctttctggaatctttttctcctgtatataaacatgctcacgat
tttttaatagcaatatcagaacctgtatgccgacctgaatatattcatgaatataagcta
actgcttattcactttatgctgcagttagtgtaggtcttcaaacagaagatataatagaa
tatttaaaaagattgagcaagactagtgttcctgatggcataattgaatttataaaacta
tgtacattatcatatggaaaagttaaacttgttttaaaacataataagtattttattgaa
tctccgtttccggaagttttacaaagattattaaaagatccagtaattcaagaatgtcga
ttgagaaaaattgtagaagatacagaagttgatgacattactacaaatattcagaccaaa
ataaaaactcagtttggagcaaaatcactcgcaaatacatttgcacctagtaaaacaaat
ccagagactcctgaatctggccaaatatcagcagaaacagctaatattccagaagacata
actgcgttttatagtaaaattgataaagaggatgaagatgaggaagaatatcaagaatta
aaaacagttagctttgaagtgaatcaggaaaaaattgaagttatacaaaaacgatgtatt
gaattggagcatcctttattagcagaatatgatttccgcaatgatagtgtaaatccggat
ataaatattgatttaaaaccgtcagctgtattaagaccataccaggagaaaagtttgcgt
aaaatgtttggtaatggacgagctagatccggagtaatagtcttaccttgtggcgctggt
aaaagtttagtcggagtcacagcttgttgtacagtacgtaaacgcgctctggtattatgt
aactctggtgtgtctgtcgaacaatggaaacaacaattcaaaatgtggtctaccgctgat
gattcgatgatttgtcgatttactagtgaagcaaaagataaacctatgggttgtggaata
ttagtaactacatattccatgattactcacactcagaaacgttcttgggaagctgaacaa
acgatgcggtggcttcaagaacaagaatggggtattatggtcttagatgaagtacacact
attcctgcaaaaatgttccgaagagtgttaacgattgttcagtctcattgtaaattgggt
ttaacagcaacacttttgcgagaagatgataagattgccgacctgaattttttaattgga
cctaaattatacgaagctaattggttggaattacaaaaaagaggatttattgcaagggta
caatgcgctgaagtttggtgtcctatgactccggaattttatagagaataccttgcttgc
aaaatgagcaaaaaattgttattgtatgtgatgaatccaaataaatttcgttgttgtcaa
tatttaatccgataccatgaaagacgtggggataaaacaatagttttctcagataatgtg
tttgcattaaaacactatgctattaaaatgaataagccatatatttacggtcctactagt
caaaatgaaagaatacaaatattgcaaaattttaaatttaacatgaaagtgaatacgata
tttgtcagtaaagtggcggatacttctttcgacttaccagaagctaatgttttaattcaa
atttcttcccatggtggatctagaaggcaagaagcgcaacgattaggacgcatacttaga
gctaaaaaaggtgcggttgcagaagaatataacgcatttttctatacgcttgtctcgcaa
gatacaatggaaatgaattattcgagaaaacgtcaacgttttcttgtaaatcaaggatat
gcatataaagttatcacaaaactcgcaggcatggatgaggaaccagatttgatgtatgca
aatcgagaagaacaaggtcaattgttgcaacaagtgttaacagctagtgatacagatgct
gatgaagaaaaaatacctggtgaaggaccaagaccaattgtgcgtaaaactggtacaatg
gcgtcaatgtcaggggcagatgatgctatctattacgaatataaaaaagctcctagttca
tcaacagcaaacaaacatcctctatttaaaaaattcagaacataa
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