Harpegnathos saltator (Jerdon's jumping ant): 105188755
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Entry
105188755 CDS
T03918
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03030
DNA replication
hst03410
Base excision repair
hst03420
Nucleotide excision repair
hst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105188755
03410 Base excision repair
105188755
03420 Nucleotide excision repair
105188755
03430 Mismatch repair
105188755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hst03032
]
105188755
03400 DNA repair and recombination proteins [BR:
hst03400
]
105188755
DNA replication proteins [BR:
hst03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105188755
DNA repair and recombination proteins [BR:
hst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105188755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
DNA_pol3_delta
RuvB_N
AAA_30
AAA_22
BRCT_2
AAA_18
AAA_5
AAA_17
AAA_14
AAA_33
RNA_helicase
AAA_assoc_2
AAA_16
AAA_19
PTCB-BRCT
TSP_3
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
105188755
NCBI-ProteinID:
XP_011148682
UniProt:
E2C0X4
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MPRASNNKNGANSAKDIRSYFAPIANSQKKNSELISKPQKRRVISSDEDEEKPKTTAKRS
KILQKIKKTVILSDSEDDMINDSKQPEANKTNGNKESLKKIVSPSELFSKKPITRVEETK
VNKKLQKMESEFHNDDDFDAVLNQLDECKNIQNIKKEKGSTKNANISNSHEAITKAEVSS
NKSKKKKEKGSSEKSHNETNETNKIKDKEVKSSNKDNLSKTVTSSPKRKLQKRKKSNSSS
NEDLDTNDKHTRNISKKFNFTNMLTISISASTTKDEDIGKRSSNKKKTKDTDLFEERIEK
KRQQAILYEKYLQRGGARNPGSKTIPTGAKNCLAGLTFLTTGVFESLERNEVEDLIKNYG
GRIVNSVSSKVNYIMVGDEAGPAKLAKANTLSIKQITEDDLLEMIRTRPEGKSEDIKPTK
AKPNVKKMSSKSESDTSPSPNKTKALLVSPKKETSPISSLKIKMSPKSVEIKISLPEPKQ
TSDISSNLQEATTNVSSEPLVEKYRPKTLKQIIGQQGDRSSAHNLYVWLRDWHKNRQDPK
SSSKQNNGQSFKAALLSGSPGVGKTTTAQIVCKELGYDLLEFNASDTRSKTLLKEQVSGL
LSNTTMKDYCTGNKQKITSKHALLMDEVDGMAGNEDRGGLQELVNLIKHTDVPVICICND
RFNTKMRTLSCHTYDLKFPKLRVEQIRSSMKSLCFKENIQISTEDLDRLIESTNYDIRQV
INHLEFLSGKTAHVEAADKKHSNKNFKLGPFDVAKLVFNAAEQRSMNLNDKIGLYFHDYN
IAPLFVQENYPAVKLSQVSSLQRLEKIARAADSISQGDLIEKVMRSSMMWSLLPLHACFS
FVIPGNEMSGNLDSMVRFPGWFGRNSKATRFNRLMQELTTHTRLATGANKDALNLDYMVH
IRNAVVKPLLDNGADGIEAAIAVMGKYHLMREDLDSMMEISLWPGISDPTSNLDSKVKAA
FTRAYQKNSPMLPYAINSAVTTKKRSAQDDDLMDEEEPEEEEDNIDSDKMVKVKKPTVAS
TSKAATIKKTDGPAKKRGRGRGKAK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagcaagtaataataaaaacggagcaaactctgccaaggatataagatcctat
tttgcgccgatcgcaaattctcagaaaaaaaatagcgaattgatttcaaaacctcaaaaa
agacgtgtaatttcatctgatgaggatgaagagaaaccgaaaacaactgcaaaacgctcc
aagatattacaaaaaataaaaaagactgtaatcttatcagactctgaggatgatatgatt
aatgattctaagcaacctgaagcaaataaaacaaatggaaataaagaatcactgaagaaa
attgtctctcccagtgagttgtttagtaagaaacctataacaagggtagaagaaacaaaa
gtaaacaagaagttacagaaaatggaatctgaatttcataatgatgatgattttgatgct
gtattgaatcaattggatgaatgtaagaatatacaaaacataaagaaagaaaaaggtagt
actaagaatgcaaatatatctaacagtcatgaagcaataacgaaagcagaagtaagttct
aataagagcaagaaaaaaaaagaaaagggttcctcagaaaaatcacacaatgaaacaaat
gaaacaaacaaaataaaagataaagaggtgaagtcttcaaataaagataatctttcaaaa
actgtcacaagttctccaaaacggaaactacaaaaaaggaagaaaagtaattctagttca
aatgaggacttagatacgaatgataagcatactcgtaatatatccaaaaagtttaacttc
acaaatatgctaaccatctcaatatctgcctctactacaaaagacgaagatattggaaag
cggtcatcaaacaagaaaaaaactaaggatactgacctgtttgaagaaagaatagaaaag
aaaagacaacaggctatcttatatgagaaatatcttcagagaggtggtgccagaaatcct
ggttcaaaaacaatccctacaggtgctaaaaattgtttagctggtttaaccttcctgacc
acaggtgtctttgagtccttagaaagaaatgaagttgaagatttaataaagaattatgga
ggccgtattgtaaactctgtgtcaagtaaagtcaattacatcatggttggagatgaagct
ggtccagctaaattggcaaaggcaaacactttaagcatcaaacaaataaccgaggatgat
ctgttagaaatgatccgcacaagaccggaaggtaaatctgaagatatcaagccaacaaaa
gcaaaaccaaatgtgaaaaagatgtcgagtaaatctgaaagtgatacatcgccatcgccg
aacaagacgaaagcactgttagtttcgcccaagaaagaaacttcgccaatctcatcattg
aaaatcaaaatgtcaccaaaatcagtggaaataaaaatttcgttaccagaaccgaaacag
acctcagatataagcagtaatttacaggaggcaactacaaacgtcagttcagaaccatta
gttgaaaaatacaggcctaaaactttgaagcaaattataggtcaacaaggagacaggagt
tccgcacacaacttgtacgtctggctgcgtgattggcacaagaatcgccaagatccaaaa
tcctcgagtaagcaaaacaatggacaaagtttcaaggcagccttgttatctggctcacca
ggcgttggtaaaacaacgactgctcagattgtttgtaaagagttgggatacgatctgtta
gaattcaatgcttctgataccagaagcaagacactcctgaaagaacaagtgtcaggattg
ttgtctaataccacgatgaaagattactgcacaggtaacaaacaaaagatcacaagcaag
cacgcgttgctaatggacgaagttgacggtatggctggtaatgaggatcgcggtggcttg
caggaattggttaatttgatcaaacataccgacgtgccggttatctgtatatgtaatgat
cgattcaacacgaaaatgaggaccctctcctgtcacacttacgatctgaaatttccaaag
ctcagagtcgagcaaatcaggagttcgatgaaatccctgtgctttaaagagaacatacaa
atctcgacggaggatctcgatcgcttgatcgagtcgacgaattatgatattcgacaagtg
atcaatcacttggaattcctcagcggaaaaacggctcatgtagaggcggccgacaagaaa
cattctaacaagaacttcaaactcggtccattcgacgtcgcgaaactggtgttcaacgct
gcggaacagcggagtatgaatctcaacgataaaatcggcttatacttccacgattataac
atagcgcctcttttcgtgcaggaaaattaccctgccgttaaattatctcaggtgtcatct
cttcagaggctggagaagatcgctcgggcggccgacagtatatcccagggtgatctcatc
gaaaaagtgatgaggagtagcatgatgtggagtctgcttccgttacatgcctgtttctcc
tttgtcataccgggcaacgaaatgtcggggaatctcgactcgatggtacgatttccgggt
tggttcggacgaaactcgaaagcgacgagattcaatagactgatgcaagagttaacgacg
catacgcggttggccacgggtgcgaacaaagacgccctcaatttagattacatggtccac
atacggaacgctgttgtaaaacctctgttggataacggcgccgatggtatagaagcagcg
attgctgttatgggaaagtatcatctaatgagggaggacttggactcaatgatggaaatt
tctctctggccgggcataagtgatcccacgagtaatcttgatagcaaagtgaaagcagcg
tttacgagagcgtatcagaagaattctcctatgttgccatatgcaattaacagtgctgtc
actacaaaaaaaagatccgcgcaagatgacgatttaatggatgaggaggaacccgaagag
gaggaagacaatatcgattcggacaaaatggtcaaggtaaaaaaacctaccgtcgcttcc
actagcaaagctgctacaatcaaaaaaactgatggaccagctaaaaagcgtggaagagga
cgcggtaaagcaaaatga
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