KEGG   Herbaspirillum seropedicae Z67: ACP92_00100
Entry
ACP92_00100       CDS       T04519                                 
Name
(GenBank) type VI secretion protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ACP92_00100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hsz02044]
    ACP92_00100
Secretion system [BR:hsz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ACP92_00100
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF3540 DUF6484 UvrA_inter
Other DBs
NCBI-ProteinID: AKN63773
LinkDB
Position
29277..32018
AA seq 913 aa
MLYRILSEALSTWTQKARAIRLRLPPSHQALQDALLVMHVTGRESLCGAMEYELLCLTSR
EDLALEDFVALPVEIQLVTDLGLLRTVCGFIAEAHAGQLDDELVSYRLVLRDALSLMGHR
INTRVFLRASEADVTQALVSEWRQRSPLMASSFEVDWSLLAERFPAREFIMQHNESDADF
LRRLWKRRGISWFIRPGEPPLPHQAGSPRHTLVLFDDAVQLPRNAAGAVSYRQDHAPAEE
DGIVRWLGTRRLRAGSVSRHAWDHAQDGPMRSQVNTVAEQGELGDHFARLLDDYFIEAPH
IADDREDFHQIATARMQRLAQETAEFQADSTIRALRVGEWIGVKDHPELDRRAAHEREFV
ITRLEVYAENNFPASLDEHVRLVARHHESSLEDLAPLRRRCLAQGRRYLNRFTCVRRGTP
LVAAFDPRVDLPAVRVQNAHVVGPAGEELYCDALGRIKLRFHGTRMQDHQHAGGAGASGS
ERDSAWVRVASHWAGRQWGAISLPRVGDEVLVDFLGGDPDKPIVVGRVYNGQSLPPAFSR
VGSLPGNRFLAGIKSKEIQGQRYNQLRLDDTPQQISAQLASQHGQSELNLGWLTHPRAGG
RSDARGEGAELRTDQALALRGGQGVLISAVMRQEASGTQLDRAEMLGLLHVLQDVQQQLA
TLAQTHHADDTQLQTFSRLRDQLDAWEAGSNTQAKSDGGGKPMVAVTAPAGVAITSDEGV
ALGAQKEIDLISVGNTQFSAGKKLLARVAESICLFAQRLGIQLVAANGKLQLQTHGGDVE
VTSARRIVLTAADEIVLQAPRLRLQAQGAQIDLGGGVITQQSSGDHVIRSGNFHHVSGAD
SQPPGVELPASTMRTDERFILARRGSGRPHVRQRYRIELDDGSVIEGVTDEQGRTALSQD
MAMRIARLRIVKE
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgctctaccggatactttccgaggcgctttccacctggacgcagaaggctcgcgctatt
cgcttgcgtctgccgccctctcatcaagcactgcaggatgcactgctggtcatgcacgtg
acggggcgcgaatcgctgtgcggcgccatggaatatgaacttctatgcctgacttcgcgc
gaagatctggctctcgaggatttcgttgcactgcctgtggaaatccagctggtcacggat
ctgggcctgctgcgcacggtgtgcggcttcatcgctgaggcccatgcaggccagctggat
gacgagctcgtcagctatcgcctggtgctgcgcgatgccctgagcctgatgggccatcgc
atcaacactcgcgtcttcctgcgggccagcgaagccgatgtgacgcaggcgctggtgagc
gagtggcggcaacgcagtcccctgatggccagcagtttcgaggtggactggtcactgctg
gcagagcgcttccccgcgcgcgaattcatcatgcagcacaacgaatccgatgccgacttc
ctgcggcgcctatggaaacgtcgtggcatcagctggttcatccgccccggtgagccgcct
ttacctcaccaggcgggcagtccgcgccataccctggtgctgtttgacgacgccgtgcaa
ttaccgcgcaatgcagctggcgccgtttcctaccggcaggatcacgcgcctgcagaagag
gatggtatcgtccgctggctgggtacccgtcgtctgcgcgcgggcagtgtcagtcggcat
gcctgggatcacgcgcaggatggacccatgcgcagccaggtgaatacggtagccgagcag
ggcgagctgggcgaccacttcgctcggctgctggatgactatttcatcgaagcgccgcat
attgccgatgatcgcgaggacttccaccagattgccactgcgcgcatgcagcggctggcg
caggagactgcagagttccaggccgactccaccattcgtgcgctacgggtgggggaatgg
atcggcgtaaaggatcatcccgaactggaccgacgggctgcgcatgagcgcgaattcgtc
atcacccggttggaggtgtacgccgagaacaactttcctgcctccctcgacgagcacgtc
cggctggttgcgcggcatcatgaaagctcccttgaggacctggcgcccctgcgccgccgc
tgcctcgcacaaggtcggcgttacctgaatcgcttcacctgcgtgcgtcggggcacgccg
ctggtcgcggcctttgatccacgcgtggaccttcccgcagtgcgcgtacagaacgcccat
gtggtcggtccggccggcgaggaactgtactgcgatgcgttgggccgcatcaagctgcgg
tttcacggtacgcgtatgcaggaccaccagcatgcgggtggtgcaggcgccagcggcagt
gaacgggattcggcctgggtgcgcgtagccagccattgggcgggccggcaatggggcgcg
atcagcctgccgcgagtgggcgatgaagtcctcgtcgatttcctgggcggtgatccagac
aagcccatcgtggtcggccgagtgtacaacggccaatccctgccaccggcgttcagccgg
gttggcagcctgccgggaaaccgcttcctggcaggcatcaagagcaaggaaatccaaggc
caacgctacaaccaactacgcctggacgacacgccgcagcagatcagcgcccagcttgcc
tcgcagcatgggcagagcgaactgaacctgggttggcttacccatcctcgtgcaggaggt
cgtagtgatgcgcgtggcgaaggcgccgagctgcgcaccgaccaggccctggcactgcgc
ggcgggcaaggcgtactgatcagtgccgtgatgcgccaggaggccagcggtacgcaactg
gatcgtgcggagatgctgggtctgctacacgtgctccaggacgtgcagcagcaactagcc
accctggcccagacccatcatgcggacgatacccagctccagacattcagccggttgcgc
gatcagcttgatgcctgggaggccggcagcaacacgcaggccaagagcgatggtggcggc
aagccgatggtcgccgtgactgcgccggcgggcgtggccatcaccagcgacgaaggggtg
gcccttggcgcacagaaggaaattgatctcatcagcgtgggcaacacgcaattctccgcc
ggcaagaagctgctggcacgtgtggccgagagcatctgtctgttcgcccagcgcctgggc
atccagctggttgccgccaacggaaagctgcagttgcagacccatggcggtgacgttgaa
gtgacttcggctcgccgcatcgtcctgaccgcagcggacgagatcgtcctgcaggcgcct
cgcctacggctgcaggcgcagggggcgcagattgatctgggaggtggcgtcatcacccag
caaagcagcggtgaccacgtcatccgttccggcaatttccatcatgtgagcggcgccgac
agccagcctccgggcgtggagctgccagccagcacgatgcgaactgacgagcgcttcatc
ctggcgcggcgcggcagtggccggccccatgtgcggcagcgctatcgcatcgagcttgat
gacggcagcgtcatcgaaggcgtcaccgacgaacagggtcgcacggcattgagtcaagac
atggccatgcggatcgcgcgcctgcgcattgtgaaggagtag

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