Herbaspirillum seropedicae Z67: ACP92_17085
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Entry
ACP92_17085 CDS
T04519
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz03030
DNA replication
hsz03430
Mismatch repair
hsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACP92_17085
03430 Mismatch repair
ACP92_17085
03440 Homologous recombination
ACP92_17085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsz03032
]
ACP92_17085
03400 DNA repair and recombination proteins [BR:
hsz03400
]
ACP92_17085
Enzymes [BR:
hsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACP92_17085
DNA replication proteins [BR:
hsz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACP92_17085
DNA repair and recombination proteins [BR:
hsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACP92_17085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKN66791
LinkDB
All DBs
Position
complement(3912768..3913502)
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIILDTETTGLSPRNGNRILEIGCVEVLNRQLSGKNLHFYINPERDSEEGALAVHGLT
TEFLADKPTFKQIAAEFLDYVRGAQIIIHNAPFDVGFLDAELALLGLPPFKDHVIDVVDS
LQMAKELHPGRRNSLDALCDRYGISNAHRVLHGALLDAELLAEVYLSMTRGQNSLTMDLG
AEEDVSEGEGKLELAPLAEVIVVAASEEELGLHEDVLNQLDKEARGSCVWRFEPPPPEAT
AEAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcatcctcgataccgaaaccacgggcctttcgccacgcaacggcaaccgc
atcctggaaatcggttgcgtggaagtgctcaaccgccagttgtcgggcaagaacctgcat
ttctacatcaaccccgagcgtgactccgaagaaggcgcgctggccgtccacggcctgacc
accgaattcctggccgacaagcccaccttcaagcagatcgccgccgagttcctcgactat
gtacgcggggcgcagatcatcatccacaacgcccccttcgacgtcggcttcctcgatgcc
gaactggccttgctgggcctgccgcccttcaaggatcacgtgatcgacgtggtggactcg
ctgcagatggccaaggaactgcaccctggccggcgcaattcgctcgatgcgctgtgcgac
cgctatggcatttccaacgcccaccgcgtcctgcacggcgcgctgctggatgcggagttg
ctggccgaagtctatctctccatgacccgtggtcagaattccctgaccatggatctgggc
gcggaggaagatgtcagtgaaggcgagggcaagctggagctggcgccgctggccgaggtg
atcgtggtggcggccagcgaggaagagctgggtctgcatgaagatgtgctgaaccagctc
gacaaggaagcccgcggcagctgcgtctggcgtttcgaaccgccgccgccggaggcgact
gcagaggcagcgtga
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