Hydrogenophaga taeniospiralis: KI616_24315
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Entry
KI616_24315 CDS
T08018
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
htn
Hydrogenophaga taeniospiralis
Pathway
htn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
htn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI616_24315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htn03400
]
KI616_24315
Enzymes [BR:
htn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KI616_24315
DNA repair and recombination proteins [BR:
htn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KI616_24315
Prokaryotic type
KI616_24315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UCU93828
LinkDB
All DBs
Position
complement(5154190..5154936)
Genome browser
AA seq
248 aa
AA seq
DB search
MQGALDWGGVAAGPEVLTPRLQSAYPAQWPVQADWAALVNGFWGSAAGQSLQAFLQQRLD
SGAVIYPPQPLRALALTPLADVRVVILGQDPYHGPGQAEGLAFSVAPGVRIPPSLRNMFK
ELQRDLGLAPPASGSLVRWAGQGVLLLNTCLTVEDGLPASHAGRGWEVLTDALIRRCSET
GGPKLFLLWGAHAQKKAALIDGARHQVLSANHPSPLSASRGPAPFLGCGHFGAVNHWLKA
SGQVPVAW
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcgcattggattggggtggtgtggcggcgggtccagaggttttgaccccgcgg
ctgcagtcggcctatcccgcacagtggccggtgcaggccgactgggcggcgctggtcaac
ggcttttgggggtctgccgccgggcagtcactgcaagccttcttgcagcagcggctcgac
agcggtgccgtcatctatccgccgcagccgctgcgggccttggcgctgacgccgctggcc
gatgtgagggtggtgatcctgggccaggacccgtaccacgggcctggccaggccgaggga
ctggcgttttccgtggctcccggtgtcaggattccgcccagcctgcgcaacatgttcaag
gagctgcagcgcgatctgggtctggctccgccggccagcggctcgctggtgcgttgggcc
gggcagggcgtgctcctgctcaacacctgcctgaccgtggaagacggcctgcccgccagc
catgccggtcgtggctgggaagtgctgaccgacgccctgatccggcgttgcagcgaaaca
ggcggccccaaactgtttctgctgtggggcgcccacgcccagaaaaaggccgcgctgatc
gatggtgcccgccatcaggtgctcagtgccaaccacccgtcgcccctgtcggcgagccgg
ggcccagcgccgttcctcggttgcggccatttcggcgctgtcaaccactggctgaaagcg
tccggacaagtgcctgtggcgtggtga
DBGET
integrated database retrieval system
