Humibacter sp. BT305: DVJ78_04675
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Entry
DVJ78_04675 CDS
T05558
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
hum
Humibacter sp. BT305
Pathway
hum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DVJ78_04675
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DVJ78_04675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hum02000
]
DVJ78_04675
Transporters [BR:
hum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
DVJ78_04675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AXH37168
LinkDB
All DBs
Position
973930..974964
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AA seq
344 aa
AA seq
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MSLTRFTKRMLVTGALVASAALALSGCGAITTGNGSDSSSADGGFQLADYIQQRVDNGDP
LRIKLSYHDPSLAFATPISKGMERAGEELGADVQLIGPTGGDAAKQVSELQTLIQQQSVD
ALAVSSASSDALKPVIAQAYDAGIPIISFNTDNPGSKQMGFVGQDLKASGQSESEQLREV
LGDGATGKVVVFSLDTGAGWSNDRFSGFEAGMEGSGLEVVGPVNVGNEPNAAYNTVESTM
SGQSGVVAIAGLDCCSTTAAAKWVEQSGNTGKITMVGFDLLPQTADFVKNGVVSFTISQN
PEEQGYQAVKVLYDFLKDGTPIEGVDTGAQFITLENIGEATVEG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacccgattcaccaagcggatgctcgtcacaggcgcgctcgtcgcttcggcc
gcgctcgccctcagcggctgcggcgccatcacgaccggcaacggcagcgactcgtcgtcg
gccgacggcggcttccagctcgccgactacatccagcagcgcgtcgacaacggcgacccg
ctgcgcatcaagctcagctaccacgacccgtcgctggccttcgcgacgccgatctcgaag
ggcatggagcgcgcgggtgaggagctcggcgccgacgtgcagctgatcggacccaccggt
ggcgacgccgcgaagcaggtctcggagctgcagaccctcatccagcagcagtcggtggat
gcgctggccgtgtcgagcgcctcgagcgacgccctgaagccggtcatcgcccaggcgtac
gacgcgggcatcccgatcatctccttcaacaccgacaacccgggctcgaagcagatgggc
ttcgtgggtcaggacctcaaggcgtccggccagtccgagtcggagcagctgcgcgaggtg
ctcggcgacggcgccacgggcaaggttgtcgtgttctcgctcgacaccggcgcgggctgg
tcgaacgaccggttcagcgggttcgaggcgggcatggagggctcgggcctcgaggtcgtc
gggccggtgaacgtcggcaacgagcccaacgccgcgtacaacacggtcgagtcgaccatg
tcgggccagtccggcgtcgtcgccatcgcgggtctcgactgctgcagcacgaccgccgcg
gcgaagtgggtcgagcagtccggcaacacgggcaagatcaccatggtcggcttcgacctg
ctgccgcagaccgccgacttcgtgaagaacggggtcgtctcgttcacgatcagccagaac
cccgaggagcagggctaccaggccgtcaaggtgctgtacgacttcctcaaggacggcacc
ccgatcgagggcgtcgacacgggcgcccagttcatcacgctggagaacatcggcgaagcc
acggtggagggctga
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