Humibacter sp. BT305: DVJ78_10795
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Entry
DVJ78_10795 CDS
T05558
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVJ78_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hum03019
]
DVJ78_10795
03016 Transfer RNA biogenesis [BR:
hum03016
]
DVJ78_10795
Enzymes [BR:
hum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DVJ78_10795
Messenger RNA biogenesis [BR:
hum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DVJ78_10795
Transfer RNA biogenesis [BR:
hum03016
]
Prokaryotic type
tRNA degradation factors
DVJ78_10795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KhpA-B_KH
KH_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
AXH35826
LinkDB
All DBs
Position
2303637..2305928
Genome browser
AA seq
763 aa
AA seq
DB search
MEGPEIKFAETVLDNGKYGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSVSKHPKD
SFDFFPLTIDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
VVITVLSIAPDEFYDALAINAASASSQISGVPFSGPIGGVRLALMPGYGSEPDQWIAFPK
YSQLQEAVFDLVVAGRVVENADGSSDVAIMMVEAEATEGSWNLIKAGATKPSEAVVAEGL
EAAKPFIRQLVEAQASLASQSAKEIQSYPIFKAYNQEAYDAVAGLAYDELVNVYQIADKI
ERQNADDALKERVKAAIQEKVDAGELGGDIPPMVSAAYKAVTKVVVRGRILRDGVRIDGR
GLADIRPLDAEVAVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPITHKRYLHH
YNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTS
MGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYAALTDILGAEDALGDMDFKV
AGTSEFVTAIQLDTKLDGIPSSVLDGALKQAKAARDAILNVLNAAIDEPDELAPTAPRVI
SVQIPVDKIGELIGPKGKTINAIQDETGADISIEEDGTVYIGATDGPSAEAARAQVNAIA
NPQNPEVGEQFLGTVVKIATFGAFVSLLPGKDGLLHISEVRKLAGGKRVENVEDVLGVGQ
KILVEITKIDDRGKLSLAPVIAEPADTEGSAAHSEGPEAPAEG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcctgagatcaagttcgccgagaccgttctcgacaacggcaagtacggcacc
cgcacggtccggttcgagaccggacgcctcgcccagcaggcccagggcgcagtcgcggcc
tacctcgacgaggagaccatgctgctctccgcgacgagcgtgtcgaagcacccgaaggac
agcttcgacttcttccccctgaccatcgacgtcgaggagcggtcgtacgcggccggcaag
atccccggctcgttcttccgccgcgagggccgcccgtcgaccgaggcgatcctcgtctgc
cgcctcatcgaccgcccgctgcgcccgtcgttcgtcgacggcctccgcaacgaggtccag
gtcgtcatcaccgtcctgagcatcgcgcccgacgagttctacgacgccctggcgatcaac
gcggcctccgcgtcgagccagatctccggcgttccgttctccggcccgatcggcggcgtg
cgcctggcgctcatgcccggctacggctcggagcccgaccagtggatcgcgttccccaag
tactcgcagctgcaggaggccgtgttcgacctcgtcgtcgccggccgcgtggtcgagaac
gccgacggctcgtccgacgtcgccatcatgatggtcgaggccgaggcgaccgagggcagc
tggaacctcatcaaggccggcgcgaccaagccctccgaggccgtcgtcgccgagggcctc
gaggccgccaagccgttcatccgtcagctcgtcgaggcgcaggcctcgctggcgtcgcag
tcggcgaaggagatccagtcctacccgatcttcaaggcctacaaccaggaggcgtacgac
gccgtcgccgggctcgcctacgacgagctcgtgaacgtctaccagatcgccgacaagatc
gagcgccagaacgccgacgacgccctcaaggagcgcgtgaaggcggccatccaggagaag
gtcgacgccggggagctcggcggcgacatcccgccgatggtctcggccgcgtacaaggcc
gtcaccaaggtcgtcgtgcgcggacgcatcctgcgcgacggcgtccgcatcgacgggcgc
ggcctggccgacatccgtccgctcgacgccgaggtcgccgtgatcccgcgcgtccacggt
tcggccatcttccagcgcggtgagacccagatcctgggcgtcaccacgctgaacatgctg
aagatggagcagcagatcgactcgctgtcgcccatcacgcacaagcggtacctgcaccac
tacaacttcccgccgtactcgaccggtgagaccggtcgcgtcggttcgccgaagcgtcgc
gagatcgggcacggcttcctcgccgagcgcgccctcgtgccggtgctgccgagccgcgag
gagttcccctacgcgatccgccaggtctctgaggcgctcgggtccaacggctccacctcg
atgggctccgtctgcgcgtcgaccctgtcgctgctgaacgcgggtgtgccgctgcgcgcc
cccgtcgccggcatcgcgatgggcctcgtctccgacgaggtcgacggcgagacccgctac
gccgccctcaccgacatcctcggtgcggaggacgcgctcggcgacatggacttcaaggtc
gccggcaccagcgagttcgtcaccgcgatccagctcgacacgaagctcgacggcatcccg
tcgtcggtgctcgacggcgcgctcaagcaggcgaaggccgcgcgcgacgcgatcctcaac
gtgctgaacgccgccatcgacgagcccgacgagctggcgcccaccgcgccgcgcgtcatc
tcggtgcagatcccggtcgacaagatcggcgagctcatcggccccaagggcaagacgatc
aacgccatccaggacgagaccggcgccgacatctccatcgaggaggacggcaccgtctac
atcggcgcgaccgacggcccctcggccgaggccgcccgcgcccaggtcaacgcgatcgcc
aacccgcagaaccccgaggtgggtgagcagttcctgggcacggtcgtcaagatcgcgacc
ttcggcgcgttcgtctcgctcctcccgggcaaggacggcctgctgcacatctccgaggtg
cgcaagctcgccggcggcaagcgggtcgagaacgtcgaggacgtcctcggcgtgggccag
aagatcctcgtcgagatcacgaagatcgacgaccgcggcaagctctcgctcgccccggtg
atcgccgagcccgccgacaccgagggttccgctgctcacagcgagggcccggaggccccg
gccgagggctga
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