Humibacter sp. BT305: DVJ78_16575
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Entry
DVJ78_16575 CDS
T05558
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hum
Humibacter sp. BT305
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_16575
DNA repair and recombination proteins [BR:
hum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DVJ78_16575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
DnaB_C
AAA_22
AAA_16
AAA
ChlI
Lon_C
AAA_30
nSTAND3
NACHT
NTPase_1
DAP3
AAA_14
ATPase_2
TniB
AAA_5
GvpD_P-loop
SLFN-g3_helicase
DUF815
AAA_24
AAA_19
CbiA
AAA_18
AAA_29
IstB_IS21
CobU
ABC_tran
MCM
Bac_DnaA
KTI12
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AXH36809
LinkDB
All DBs
Position
3481245..3482579
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AA seq
444 aa
AA seq
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MATRASARTTSGFRCTECGWQAAKWAGRCGECQSWGTVVAVSEQEGILRTVKPVVVDEAR
IARPITEIDSDAASHWATGIGEFDRVLGGGLVPGAAILLSGEPGVGKSTLLLEVAAKAAS
EHLRVLYVSAEESASQVKLRAERTHSLSPTLMLAAETDLGTVLGQIDAVQPHLLIVDSVQ
TVSSSSLDSAAGSPTQVREVATSLIRIAKQRSLPVLLVGHVTKDGSIAGPRLLEHLVDVV
CQFEGDRQTSLRFVRALKNRFGPTDEVGCFEMTGDGIREVPDPSGLFLSRGSDAVSGTCV
TVALEGRRALPVEVQALVVATPSPNPRRVTNGVDSSRVAMILAVLERRARLTLSDKDVYV
STVGGVKLVEPAADLAIALALASAAQDRPLAHALAAYGEISLAGEVRPVASARIRAAEAR
RLGFTTLVDDEARHLGRALGRAFS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagagcatccgcgcgcacgacgagcggcttccgctgcacggaatgcgggtgg
caggcggcgaagtgggcggggcgctgcggcgagtgccagagctggggcaccgtggtcgcc
gtgtccgagcaggagggcatcctccgcacggtcaagcccgtggtggtcgacgaggcgcgc
atcgccaggcccatcaccgagatcgactcggatgcggcgtcccactgggccacggggatc
ggcgagttcgaccgcgtgctcggcggtgggctcgtgcccggcgccgccatcctgctctcc
ggtgagcccggggtgggcaagtccacgctgctgctcgaggtcgcggcgaaggccgcgtcc
gagcacctcagggtgctctacgtgtcggccgaggagtcggcgtcgcaggtgaagctgcgc
gcggagcggacccactcgctgtccccgacgctcatgctcgccgccgagaccgacctcggc
acggtgctggggcagatcgacgcggtccagccgcacctcctgatcgtcgactccgtgcag
acggtgtcgtcctcctcgctcgacagcgcggcaggcagccccacgcaggtgcgcgaggtc
gcgacgtccctcatccgcatcgccaagcagcggtcgctgcccgtgctgctggtcggccac
gtcacgaaggacggatcgatcgccggccctcgactgctggagcacctggtcgacgtggtc
tgccagttcgagggcgaccgccagacctcgctgcgcttcgtccgcgcgctcaagaaccgc
ttcggccccaccgacgaggtgggctgcttcgagatgacgggcgacggcatccgcgaggtg
cccgacccgtcgggcctgttcctctcccgggggtcggatgcggtgagcggcacctgcgtc
actgtcgcgctggaggggcgtcgggccctgcccgtcgaggtgcaggctctcgtcgtcgcg
acgccgtcgcccaacccgcggcgggtcacgaacggggtcgactcctcgcgggtggccatg
atcctcgcggtgctggagcggcgagcgcgtctcacgctgagcgacaaggacgtctacgtc
tcgaccgtgggcggggtgaagctggtcgagccggccgccgatctcgcgatcgcgctggcc
ctggcctcggcggcacaggaccgcccgctcgcccacgcgctggccgcgtacggcgagatc
agcctcgccggggaggtgcgtccggtggcttccgcgcgcatccgcgccgccgaggcccgc
cgcctggggttcaccaccctcgtcgacgacgaggcgcgccacctcggccgcgccctgggc
cgcgcgttctcctag
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