Humibacter ginsenosidimutans: FPZ11_11395
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Entry
FPZ11_11395 CDS
T06119
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPZ11_11395 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
huw03400
]
FPZ11_11395 (xth)
Enzymes [BR:
huw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FPZ11_11395 (xth)
DNA repair and recombination proteins [BR:
huw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FPZ11_11395 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QDZ15283
UniProt:
A0A5B8M4M5
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All DBs
Position
2478986..2479837
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AA seq
283 aa
AA seq
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MRVATWNVNSIRARVGRTVDWLVREDVDVLAMQEIKCKPEQFPREPFEEAGYELAIHGLN
QWNGVAFASRIPLEDVVTSFDGMPGFAKGREDDDLPLEARALGVTVAGIRLWSLYVPNGR
GLDDPHYTYKLDWLGTLAADTRSWLAENPDQPLALMGDWNIAPTDADNGDPTVVEGVSTH
VSVPERQAFEEFEALGLTDVVRPYQPEGFTYWDYKQLRFPRNEGMRIDFIMGSQPFAELV
THAGIHRNERKGEAPSDHVPVLVDLDVALHDDEQDEDRPMIFG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtggccacctggaacgtcaactccatccgcgcccgtgtgggccgcaccgtggac
tggctggtgcgcgaagacgttgacgtgctcgccatgcaggagatcaagtgcaagccggag
cagtttcctcgtgagccgttcgaggaggcgggctacgagctggccatccacggactcaac
cagtggaacggcgtcgccttcgcctcgcgcattcccctcgaggatgtcgtgacctccttc
gacggcatgccgggcttcgcaaagggccgggaggacgacgacctgccgctggaggctcgc
gcgctgggcgtgacggtggcgggcatccgcctctggagcctctacgtgcccaacggccgt
gggctcgatgacccgcactacacctacaaactcgactggctcgggactcttgctgctgac
acccgcagctggctcgccgagaaccccgaccagccgctcgcgctgatgggcgactggaac
atcgcgccgacggatgccgacaacggcgacccgacggtcgtcgagggggtctcgactcac
gtctcggtacccgagcgccaggcgttcgaggaattcgaggccctcggcctcaccgacgtc
gtgcgtccgtaccagccggagggcttcacgtactgggactacaagcagctgcgttttccg
cgcaacgagggcatgcgcatcgacttcatcatggggtcgcagccgttcgccgagctcgtg
acgcatgcgggcatccatcgcaacgagcgcaagggagaggcgccgagcgaccacgtgccc
gtgctggtcgacctcgacgtggcgctgcacgacgacgagcaagacgaagaccggccgatg
atcttcggctga
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