Humibacter ginsenosidimutans: FPZ11_16575
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Entry
FPZ11_16575 CDS
T06119
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
huw
Humibacter ginsenosidimutans
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
huw03000
]
FPZ11_16575
Transcription factors [BR:
huw03000
]
Prokaryotic type
Helix-turn-helix
XRE family
FPZ11_16575
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
ScfRs
Peptidase_M78
HTH_25
CCDC92
Motif
Other DBs
NCBI-ProteinID:
QDZ16160
UniProt:
A0A5B8M9S3
LinkDB
All DBs
Position
complement(3587970..3589439)
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AA seq
489 aa
AA seq
DB search
MVMVDGARTPVDDDELDAITLGRRIRERRLHQGMTLDQLAAAVERAPSQVSMIENGKREP
RLTMLRTIAQALNTTVDDLMKADAPSERVALEIAVERAVRGPVFSSLGLPGIRASKALND
DVLKVLLGLHGEIERLHRERASTPEEARRANAELREEMRARDNYYPELERQASELLTAVG
HSGGPVSQQAVSDIASRLGFTLHYVSDLPYATRSVTDKRNHRIYLPVQQPSSRDSRSPVL
QALASQVLGHDEPRSYADFLRQRVETNYLTAAVLLPEKDAVRLLTEAKNLRRISMEDLRD
AFAVSYETAAHRFTNLATTRLGIPVHFMKVHESGTIIKAYENDSVRFPSDATGAIEGTTV
CRNWTARTVFEASDRFSPWYQYTDTPTGTYWCTSRIEKAKEGEYSVSVGVPFAHVKWFRG
RETTHRAESRCPDESCCRRAPAELADAWAQHAWPAARTPTSLLAALPTGSFPGVDETDVY
EFLQAHAPA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggtcgacggagcacgcactcccgtggacgacgacgagctggatgccatcacg
ctcggtcgtcgcatccgcgagcgccggctgcaccagggcatgaccctcgaccagctcgcc
gccgccgtggagcgcgcgccgtcgcaggtgtcgatgatcgagaacggcaagcgcgagccc
cggctcaccatgctgcgcacgatcgcgcaggcactcaataccaccgtcgacgacctgatg
aaggcggatgccccgagcgagcgcgtcgcgctggagatcgcggtggagcgtgccgtgcgc
ggaccggtgttctcctcgctggggttgccgggcatccgcgcgtcgaaggcgctgaacgac
gatgtgctcaaggtgctgctcgggctgcacggcgagatcgagcggctgcaccgggagcgg
gcgtccacaccggaggaggcgcggcgcgcgaacgccgaactgcgcgaggagatgcgcgcg
cgcgacaactactaccccgaactggagcggcaggcgtccgaactgctcaccgcagtgggc
cacagtggtgggccggtgtcgcagcaggccgtcagtgacatcgcgagccggctcggtttc
acgctgcactacgtgagcgacctgccctacgccacccgttccgtcaccgacaagcgcaac
catcgcatctacctgccggtgcagcagccgtcgtcgcgcgactcgcgctcccccgtgctg
caggctctggcgagccaggtgctcggccacgacgagccgcgcagctacgccgactttctg
cgccagcgcgtcgagacgaactacctgaccgccgccgtgctgctccccgagaaggatgcc
gtgcgcctgctcaccgaggcgaagaacctgcgccgcatctcgatggaagacctgcgcgac
gcgttcgcggtctcctacgagacggccgcgcaccgcttcacgaacctggcgacgacgcgg
ctgggcatcccggtgcacttcatgaaggtgcacgagtcgggcaccatcatcaaggcctac
gagaacgactcggtgcggttcccttcggatgccacgggcgcgatcgagggcaccacggtg
tgccgcaactggacggcgcgcaccgtgttcgaggcatccgaccgcttcagcccctggtac
cagtacacggacacgccgaccggcacctactggtgcacctcacgcatcgagaaggccaag
gagggcgagtactcggtgagcgtcggcgtgccgttcgcgcacgtcaagtggttccgcgga
cgcgagaccacccaccgcgccgagtcgcgctgcccagacgagagctgctgccgccgagcg
cccgccgagctcgcggatgcctgggcacagcacgcgtggcccgccgcgcgcacgcccaca
tcgctgcttgcagcgctgccgacggggagcttccccggcgtggacgagaccgacgtatac
gagtttctgcaggcgcacgcgccggcctga
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