Haloferax volcanii: HVO_3010
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Entry
HVO_3010 CDS
T01200
Symbol
hef
Name
(GenBank) ATP-dependent RNA helicase/nuclease Hef
Organism
hvo
Haloferax volcanii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
DEAD
RNA_helicase_helical
ResIII
HHH_5
HHH_2
HHH
5_3_exonuc
MtrB
Motif
Other DBs
NCBI-ProteinID:
ADE03490
UniProt:
D4GYC2
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Position
complement(2841653..2844229)
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AA seq
858 aa
AA seq
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MSASEDVAYVDHPLLAPSFIERRLYQIRLAGTARDGHTLVCLPTGLGKTTVSLLVTAQRL
HDVGGKSLFLAPTKPLVQQHADFYREALTVPDDEIVVFTGDVRPDDRAELWQEAQIVIAT
PQVIENDLIGNRISLRDVTHLTFDECHRASGDYAYVYIAERYHAAAENPLVTGMSASPGG
DEEAILEVCENLGIVDVEVMTEEDADVSEYTHDTDVEWNRIQLPDEILEIRDALNEVITD
RLEKLKQLGVTKSTKPDISQKKLNRMRAELQRLMNADKSEGYKGMSTHAEVMKLRRAVEL
VETQSVESVRRYFERQRNAARSSGASKASQRLVAEPKVREAMRKAESFDGLHPKFRKTRI
LLAETLGIQNGERVIVFTESRDTAEALTEFLSESFSVRRFVGQGDREGSDGMTQNEQQET
LDKFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAIRSIQRKGRTGRQADGRVVVL
LAEDTRDEAYFWISRRREKTMQNELRDLKGAADDLEAELDPSQRDLSAFAGDDASSAGSA
GSSTRNEGVDVASEGDANGASATASSASNGRTATAAATDSDGQSGLADFGPSDEALARAD
DGDDSHGEDADPADSGDDPASDAEGDEVDDSATVAAAGTDDEDTVEIVVDQRELDSNIAR
TLSKREDLTTRLETLAVGDYVLSDRVAVERKSVSDFLDTLTGGDRSIFEQIADLTRHYAR
PLLVIEGRGLYEERNIHPGAIRGALSSVAVDFNVSVLFTEDEDDTAELLATIATREQTDR
ERTVSVHGGKSAKTLDEQQEYVVSAIADIGPVTARTLLEAFGSVEAVMTANEEDLKEVRG
VGQVTAERIREVVGSEYR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctccgaggacgttgcgtacgtggaccacccgctactcgcgccgtcgttcatc
gagcggcggctctatcagattcgcctcgccgggaccgcgcgcgacggccacacgctggtc
tgtctccccaccggcctcgggaagacgaccgtcagcctgctcgtcaccgcccagcgcctc
cacgacgtgggcggaaagtcgctgtttctcgcgccgacgaagccgctggtccagcagcac
gccgatttctaccgcgaggcgctgaccgtcccggacgacgaaatcgtcgtcttcaccggc
gacgttcggcccgacgaccgggccgaactctggcaggaggcccaaatcgttatcgccacg
ccgcaggtcatcgaaaacgacctcatcggcaaccgcatctcgcttcgggacgtgacgcac
ctcaccttcgacgagtgccaccgcgcgagcggcgactacgcctacgtctacatcgcagag
cgctaccacgccgccgccgagaacccgctcgtcacggggatgagcgcctcgcccggcggc
gacgaggaggccatcctcgaagtctgtgagaacctcggcatcgtcgacgtggaggtgatg
accgaggaggacgccgacgtgtcggagtacacccacgacacggacgtggagtggaaccgc
atccaactccccgacgagattctggagatacgcgacgcgctcaacgaggtcatcaccgac
cgactggagaagctcaagcagttgggcgtcaccaaatcgacgaagcccgatatctcccag
aagaagctcaaccggatgcgcgcggagctccagcggctgatgaacgccgacaagtcggag
ggctacaaggggatgtcgacgcacgcggaggtgatgaagctccgccgggcggtcgaactc
gtcgagacccagtcggtggagtcggtccggcggtacttcgagcgccagcgcaacgccgcc
cggtcgtcgggcgcgtcgaaggcgagccagcgactcgtcgccgagccgaaagtccgcgag
gcgatgcggaaagccgagtcgttcgacggcctccacccgaagttcaggaagacgcgcatc
ctcctcgcggagacgctcggcatccagaacggcgagcgcgtcatcgtcttcaccgagtcg
cgcgacacggccgaggcgctgacggagttcctctcggagagcttctcggtccggcggttc
gtcgggcagggcgaccgcgaaggctccgacgggatgacccagaacgaacagcaggagacc
ctcgacaagttccgaaacggcgagttcgaggtactcgtctcgacatccgtcgcggaggag
ggtctcgacgtgcccgaggtcgacctcgtgctctttttcgaacccgtgccgaccgccatc
cggtccatccagcggaaggggcggaccggccggcaggccgacggtcgcgtggtcgtcctc
ctcgcggaggacacccgcgacgaggcgtacttctggatatcgcgccgccgcgagaagacg
atgcaaaacgagcttcgagacctcaagggcgcggccgacgacctcgaagccgaactcgac
ccctcccaacgcgacctctcggcgttcgcgggagacgacgccagttcagccggtagcgcg
gggagttccacccgaaacgagggggttgacgtcgcgagcgagggcgatgcaaacggggcg
tcggctaccgcgtcatccgcctcgaacggccggaccgcgaccgcggcggcgaccgactcg
gacgggcagtccggcctcgccgacttcggtccctcggacgaggcgttggcgcgggcggac
gacggcgacgacagccacggcgaggacgccgacccggccgactcgggcgacgacccggcg
tcggacgcagaaggagacgaggtggacgactcggccaccgtcgccgcggcgggcaccgac
gacgaggacaccgtcgaaatcgtcgtcgaccagcgcgaactcgactccaacatcgcccgc
accctctcgaagcgcgaggacctgacgacccgactggagacgctcgcggtcggtgactac
gtcctctcggaccgcgtcgcggtcgagcgaaagagcgtctcggacttcctcgacacgctc
acgggcggcgaccgctcgatattcgagcagatagcggacctcacgcgccactacgcccgg
ccgctgctcgtcatcgaggggcgcgggctctacgaggagcgcaacatccaccccggcgcg
attcgcggggcgctgtcgtcggtcgcggtcgacttcaacgtgagcgtgctgttcaccgaa
gacgaagacgacaccgcggagctgctggcgaccatcgccacccgcgagcagacggaccgc
gagcgcaccgtgagcgtccacggcggcaagagcgcgaagacgctcgacgagcaacaggag
tacgtcgtctccgccatcgcggacatcggcccggtcacggcgcggacgctgctcgaagcg
ttcgggagcgtcgaggcggtcatgaccgccaacgaggaggacctcaaggaggtccgcggc
gtcggccaagtcaccgccgagcgaatccgcgaggtcgtcggctcggagtaccgctga
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