Haloquadratum walsbyi DSM 16790: HQ_1298A
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Entry
HQ_1298A CDS
T00375
Symbol
phr1
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwa03400
]
HQ_1298A (phr1)
Enzymes [BR:
hwa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HQ_1298A (phr1)
DNA repair and recombination proteins [BR:
hwa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HQ_1298A (phr1)
Prokaryotic type
HQ_1298A (phr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
CAJ51427
UniProt:
Q18KL9
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All DBs
Position
390242..391633
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AA seq
463 aa
AA seq
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MRLFWHRRDPRLRDNAGLAAAARADSESVLPVYVYDSDLFGAIGERQQAFWMHAVRELKE
AYRERESDLIVRAGDPGDIIPALAEEYDIDGVHCNQHYRPGRQSRRERVASELDKSGIAF
DVRTDHVLVDPGRLDASYPNHSQFHNDWEDVPKRSAYDSPPAETLVDITDSKTVPVPTVE
IDLPPSGYEAARDRLDRFCDRGIYDYNDTRDDLAQAAEKPTTAVSRMSPYLSGGMIGIRE
VWDAASSVYEAVHGNERRNADKYRYELSWREQNYHLLYYNPDLAVSNYKSIPNEIQWRDD
DEAFKSWALGQTGYPLVDAGMRQLNREGYIHNRPRQVVASFLTKHLLVDWRRGARYFTKQ
LIDHDYASNHGSWQWIASTGTDSVDVRIFDPVSQLSKYDDGANFVREYVPELSDTPTEKI
IEWPTLSPGDRAQFAPEYPDPIVGRNEGYERAQQTFEKALGKR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttattttggcatcggcgcgaccctcggcttcgagataatgctgggctggccgct
gcagcacgggctgattctgagtcggttctaccagtatatgtatatgattcagacttattt
ggcgccattggggagcgacaacaggcattttggatgcatgcggttcgtgagctcaaggaa
gcatatcgtgagcgcgaaagtgatcttatcgttcgtgctggcgatccaggcgacatcatt
ccagcattagctgaagagtatgacatcgatggtgtacactgtaatcagcactatcgaccg
ggacgccagtctcggcgcgagcgtgttgcaagtgaacttgataagtctgggattgcattt
gacgttcgaacagatcacgtgcttgttgaccccggtcggcttgatgcatcatatccaaat
catagtcaatttcacaatgattgggaagatgttccaaaacggtcagcatatgattcacca
ccggctgagacgcttgtcgatattactgatagcaaaactgtccctgtcccaacggttgag
atcgatcttccaccttcggggtatgaggctgcgcgagaccgccttgatcggttctgtgac
cgaggtatttatgattataatgatacgcgtgatgacctcgcacaggctgctgagaaacca
acaacagcagtgtcacgaatgtcaccgtatctttctggtgggatgattggtattcgagag
gtatgggacgctgcaagttcagtatatgaggctgtacacggaaatgagcgccgtaatgcc
gataaatatagatatgaactctcctggcgcgaacaaaactatcatttattatactataac
cctgacctcgcagtttcgaattataaatcgattccaaacgagatacagtggcgagatgat
gatgaggcgtttaaatcatgggctctaggacaaaccggctacccgcttgttgatgctggc
atgcggcaactcaatcgcgaaggctatattcacaaccgtccgcgacaagtggtagcgagc
tttttaacgaagcatctcctcgttgactggcgtcgcggcgcacggtacttcaccaaacaa
ctcatcgatcatgattatgcttcaaatcacgggagttggcagtggattgcatcaactggt
actgattccgttgatgttcgaatcttcgaccctgtgagccagttgtcgaaatatgacgat
ggcgcaaactttgtgcgtgagtatgttcccgaattgagtgatacaccaacagagaagatt
attgagtggccaacattgtcgcctggtgaccgtgcacagtttgccccagagtatcctgat
ccaattgtcggaagaaatgaagggtatgaacgcgcacaacaaacatttgagaaggcgctc
ggaaagcgatag
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