Halopiger xanaduensis: Halxa_0396
Help
Entry
Halxa_0396 CDS
T01532
Name
(GenBank) Polygalacturonase
Organism
hxa
Halopiger xanaduensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
DUF1565
Motif
Other DBs
NCBI-ProteinID:
AEH38999
UniProt:
F8DDB0
LinkDB
All DBs
Position
pHALXA01:114710..116260
Genome browser
AA seq
516 aa
AA seq
DB search
MTVPDTDRFDIREYGAISDSDDPATDAIQTALDECAETGGTVYVPAGRFRTGPLRIGDRT
TLHLDPGATLTFVGDYDAFPTVESRWEGWNQYGFHPCLWVTDAENVEISGRGTIDGNGQY
WWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGVTLQN
SPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKS
GKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGDVRDVAVTNCTFTDTDRGVRIK
TQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRNVTFSNITA
RNVETAGFFAGLPEQYFEGIEFDNVRIDATRPLDATDLDPAMASGYEQTHGLFCKSIADI
SFNDVRIRTADGPAMRFVDTESVTVDGLQVPDDQDAPIVSLENVDRTRIRGCAPDGESPF
VRATGETGRIELAGNYGDLAEDVEIDEESDATLESF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgcctgacacggaccggttcgacatccgcgagtacggcgcgatcagcgactcg
gacgatcccgcgaccgacgcgatccagacggcgctcgacgagtgcgccgagaccggcggg
accgtgtacgttccggccggccggttccgcacgggcccgcttcggatcggcgatcgaacg
acgctccatctggatcccggcgcgacgctgacgttcgtcggcgactacgacgcgttcccc
acggtagaaagccggtgggagggctggaaccagtacggctttcacccctgtctgtgggtt
accgacgccgagaacgtcgagatcagcggccgcggcacgatcgacggcaacgggcagtac
tggtggcagttctacggcgccgacgacgacgaactccccgagggcctgcgcgagcgcctc
gcggagttcaacgggaaaaacgacaaggcggacgacgtcagctccttcacgctccgcccg
ccgctgttccagatttccgagtccgagaacgtcaccgtctcgggcgtcaccctccagaac
tcgccgttctggaacacgcacgtcgtctactccgagaacgtgacgatctccgacgtcaac
gtcctcaatcccgcggagggcgcgcccaacggcgacgggatcgacatcgactcctcgcgg
tacgtccggatcagcgacgcgtacatcaacgccggcgacgacgcgatctgcatcaagtcc
gggaagaacgctgagggccgcgaggtcggtgaacccgcctcgcagatcaccgtcacgaac
tgcaccgtcgaggccggccacggcggcgtcgtcatcggcagcgagatgtccggcgacgtc
cgcgacgtcgcggtcaccaactgcaccttcaccgacaccgaccgcggcgtccgaatcaag
acccagcgcgaccgcggcggcgtcgttgaggacctccggttcgacaacatcgtcatgcgg
cgaatcgcctccccgttcaccatcaacggctactacttcaccccgctggacagcgagccc
gaaccggtcgacgaggggacgccgatggtccgcaacgtcacattcagcaatatcaccgcc
cgcaacgtcgagacggccggcttcttcgccgggctccccgagcagtacttcgagggcatc
gagttcgacaacgtccggatcgacgcaacgcggccgctcgacgcgactgacctcgacccc
gcaatggcttcgggctacgagcagacccacgggctgttctgcaagtcgattgccgacatc
tccttcaacgacgtccgtatccggacggccgacggcccggcgatgcggttcgtcgacacc
gagtcggtcaccgtcgacggcctgcaggttccggacgatcaggacgcgccgatcgtctcc
ctcgagaacgtcgatcgaacgcgaatccgcggctgtgcgcccgacggcgagtcgccgttc
gtgcgggcgaccggcgagaccggaaggatcgaactcgcgggtaactacggcgacctagcc
gaggacgtcgagatcgacgaagaaagcgacgcgacgctcgagtcgttctga
DBGET
integrated database retrieval system
