Hydrogenophaga sp. PAMC20947: E5678_18255
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Entry
E5678_18255 CDS
T05960
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03060
Protein export
hyc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
E5678_18255 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E5678_18255 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hyc02044
]
E5678_18255 (secD)
Secretion system [BR:
hyc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
E5678_18255 (secD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
MMPL
Sec_GG
ACR_tran
YscJ_FliF
GP3
Motif
Other DBs
NCBI-ProteinID:
QCB47802
UniProt:
A0A4P7REY6
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All DBs
Position
3999973..4001859
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AA seq
628 aa
AA seq
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MNRYPLWKYVIIVVALLIGAIYALPNLFGESPAVQVSAGRTTVRVDSSTVTQVEQALAAA
KVTPTMIQFEGTSVRARFETTDDQIKARDAIEQALNPDPANPTHIVALSLLSRTPAWLQS
LGASPMYLGLDLRGGVHFMLQVDLPAALQRRMDVLGADLRSALREKNVRHGGIARNGSSI
EVRARDAETLEAARGVVQDQFPDLAVGDAPADGDLRLVLNLKPAAAKAVQDQALKQNITT
LHNRINELGVSEPVIQQQGTDRIVVQLPGVQDTAKAKDILGRTATLEMRLSDESTEGRAA
ADGSGPVPFGSDSFPMRDGRAAIVKKQVLTTGENLTDAQAGFDSRDQQPSVTLVMDAAGG
RIMRDVSRENINKGMAIILFEKGKGEAISVATIRGELGNRFQISGSMGINEANDLALLLR
AGSLAAPMEIIEERTIGPSLGADNIAKGINSVMWGFAVIVLFMCSYYMLFGAFSSLALGL
NLLLLVAVLSMLQATLTLPGIAAMALALGMAIDSNVLINERVREELRNGAAPQSAINAGY
EHAWGTILDSNITTLIAGVALLTFGSGPVRGFAMVHCIGILTSMFSSVVFSRGLVNFWYG
RQKKLKSVSIGTVWRAGGSATTPAVKGE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgataccctctgtggaaatacgtgatcatcgtggtcgccttgttgatcggggcg
atttacgccctgcccaacctgtttggcgaatcgccggcggttcaggtgtcggcgggccgg
accacggttcgggtggacagctccaccgtgacgcaggtcgagcaggcgctggccgcggcc
aaggtgacgccaacgatgatccagtttgagggcacctcggttcgggcccgtttcgagacc
accgacgatcagatcaaggcgcgcgacgcgatcgagcaagcgctcaatcccgatccggcc
aaccccacccacatcgtggcgctgagcctgttgtcgcgcacgcccgcctggctgcagtcc
ctgggcgcttcgcccatgtacctgggcctggatttgcgcggtggcgtgcatttcatgttg
caagtggacttgcccgcagcgctgcagcgccgcatggatgtgctgggcgccgatctgcgc
tcggctctgcgcgagaaaaacgtgcgccacggcggcattgcccgcaacggcagcagcatc
gaagtgcgcgcccgcgacgccgaaacactggaggccgcgcgcggcgtggtgcaagaccag
ttccccgatctggcggtgggcgacgccccagccgacggcgatctgcgcctggtgctcaac
ctcaagccggcagcggccaaggccgtgcaagatcaggcgctcaagcaaaacatcaccacc
ctgcacaaccggatcaacgagctgggcgtgtccgagccggtgatccagcagcaggggacc
gaccgcatcgtggtgcagttgccgggcgtgcaagacacggccaaggccaaagacattctg
ggtcgcaccgccacgctggaaatgcgcctgtccgatgaaagcaccgaaggccgcgcggcg
gccgacggctcgggcccggtgccgtttggttccgacagtttccccatgcgcgatggccgt
gcagccattgtgaaaaagcaggtgctcactaccggtgaaaacctcaccgatgctcaggcc
ggcttcgattcgcgtgaccaacaacccagtgtgaccttggtgatggacgcggcgggcggg
cgcatcatgcgcgacgtgagccgcgagaacatcaacaagggcatggccatcatcttgttt
gaaaaaggcaagggcgaagccatttcggtggccaccatccggggtgagctgggcaaccgc
ttccagatttcgggcagcatgggcatcaacgaagccaacgatctggcgctgctgctccgc
gccggctcgctggccgcgcccatggagatcatcgaagagcgcaccatcggccccagcctg
ggtgccgacaacatcgccaagggcatcaacagcgtgatgtggggctttgcggtgatcgtg
ctcttcatgtgcagctactacatgctgttcggcgcgttttccagcctggcgctgggcctg
aacctgttgctgctggtggcggtgctgtccatgctgcaagccaccctgaccttgccgggt
attgcggccatggcgctggcgctgggcatggccatcgactccaacgtgctgatcaacgag
cgcgtgcgcgaagaactgcgcaatggcgccgcgccccaatcggcgatcaacgccggctac
gaacacgcctggggcacgatccttgactccaacatcacgacgctgatcgccggcgtggcc
ctgctgacctttggttcgggcccggtgcgcggttttgccatggtgcactgcatcggaatt
ttgaccagcatgttctccagcgtggtcttctcgcgcggcctggtgaacttctggtacggc
cgtcagaagaagctcaaatcggtgtccattggcacggtctggcgtgcgggcggtagcgcc
accaccccggctgtcaaaggcgaataa
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