Hymenobacter sp. DG25B: PK28_08200
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Entry
PK28_08200 CDS
T03500
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00020
Citrate cycle (TCA cycle)
hyd00620
Pyruvate metabolism
hyd01100
Metabolic pathways
hyd01120
Microbial metabolism in diverse environments
hyd01200
Carbon metabolism
hyd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PK28_08200
00620 Pyruvate metabolism
PK28_08200
Enzymes [BR:
hyd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
PK28_08200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
Biotin_lipoyl_2
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AIZ63676
UniProt:
A0A0A7LK08
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All DBs
Position
1930292..1933816
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AA seq
1174 aa
AA seq
DB search
MNIRKLLVANRGEIAIRVLRAATELGITTVAIYTYEDRYSLHRYKADEAYQVGRDDDPLK
PYLDIEGIIRTAKENGVDAIHPGYGFLSENATLARRCGEEGIIFVGPRPEVMEALGDKVA
AKKVAVQCQVPIIESSIQDLTTFEIAQEEAHRIGYPVMLKAASGGGGRGMRIIRDDEQME
RGFYEARNEALKAFGDDTVFLEKFVEQPKHIEVQLVADNHGGLTHLYERDCSVQRRYQKV
VEVAPSLNLPDHMRELLYEYALRLGRAVNYNNVGTVEFLVNPEHDRIYFIEVNPRIQVEH
TVTEMITGIDLIKTQLHIADGRRLSDPEIGLGPDVTPLKIGYAIQCRITTEDPEQDFKPD
YGTITAYRSAGGFGIRLDQGSVYTGVKVSPFFDSLLVKVSTHAPTLQGAATKMARTLDEF
RIRGVSTNIQFLQNIIANPVFMAGEANVDFIKDHQELFKFKPRLDRATKVLSFLGDVIVN
GHPDVRGLVDARRELRKPRLPEVNLATGWSMALDAHSPGAPAGNGQAVSRTAPYPPGTKQ
KLTELGPEGFSKWLREDPKIHYTDTTLRDAHQSLLATRMRTFDMLKVAESYARMHPQTFS
LECWGGATFDVALRFLHEDPWERLAKLRQAVPNILLQMLIRGANGVGYKAYPDNLTERFV
QQAAETGIDVFRIFDSLNWMPGMEACIGFVRNKTDRLAEASICYTGDILNPKRNRKYSLE
YYLRLAKQIEEAGAHILCIKDMAGLLKPYAAKELVTALRDTVSLPIHLHTHDTSSLQAAT
YLKAVEAGVDVIDVALGSLSGLTSQPNFNSVVEMLRGQPRHREFEQRSLNEFSNYWEAVR
EHYYPFESGLKAGTSEVFQHEIPGGQYSNLRPQAASLGLLDKFETVKTTFADVNQLFGDI
VKVTPSSKVVGDMALFLVSNNLTTADVLEKGPSLSFPESVRELFRGDIGQPEGGWPKDVQ
KAILKDEQPFTDRPNEHLAPIDFDAEWQKFEEKFGQRGKFTDLLSWLLYPKVFEQYWAHL
QQYGEVSVIPTLVFFYGLQPGEETIIEIARGKSIIVGLQSIGPVNEDGCRTIFFSLNGQT
RNLEIRDTSVEVKRVLNPKADKANPRQIGAPLQGLLSKVLVKDGEAVKRNAPLFIIEAMK
METTITASEDTTVQAVNLPEGTLVHADDLVVTLS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccgcaaactgctggtcgccaaccggggcgaaattgccattcgtgtactgcgt
gcggcaactgagctgggcattaccacggtagccatttatacttacgaggaccgctactcc
ctgcaccgctacaaggccgatgaagcctaccaggtgggccgcgacgacgaccccctgaag
ccgtatctggacattgaaggaatcatccggacggccaaggagaatggggtggatgctatt
catccgggctatggctttctaagtgaaaatgccacgctggcccgccgctgcggcgaggaa
ggcatcattttcgtaggcccgcgcccggaggtgatggaggccctgggtgataaggtggcc
gcgaaaaaagtggcggtgcagtgtcaggtgcccatcattgaaagcagcattcaggacctg
accacctttgaaattgcgcaggaagaagcccaccgcatcggctaccccgtgatgctgaaa
gcggcttccggtgggggcgggcggggcatgcgcatcatccgcgacgacgagcagatggag
cggggcttttacgaggctcgtaatgaggccctgaaagccttcggcgacgacaccgtgttc
ctggagaagtttgtggagcagcccaagcacattgaggtgcagctggtagccgataaccac
ggtggcctcacgcacctctacgagcgggactgctccgtgcagcgccgctaccagaaggta
gtggaagtagcaccctcgctcaacctccccgaccacatgcgggagctcctgtatgagtat
gccctgcgcctgggccgggccgtgaactacaacaatgtgggcaccgtggaattcctggtg
aaccccgagcacgaccggatttactttatcgaggtgaacccccgcattcaggtagagcac
accgtaaccgagatgattacgggcatcgacctgattaaaacccagctgcacattgccgac
ggccgccgcctcagcgacccggaaattggcctgggcccggacgtaacgccgctcaaaatt
ggctatgccattcagtgccgcatcaccaccgaagaccctgagcaggacttcaagcccgat
tatggtaccattacggcctaccgctcggcgggcggcttcggcatccggctggaccagggc
tcggtgtacaccggcgtgaaggtgtcgccgttttttgactccctgctggtaaaggtttcc
acccacgcgcccacgctgcagggcgccgcaaccaagatggcgcgtactttggatgagttc
cggatacgcggggtaagcaccaacattcagtttctgcagaacatcattgccaacccggtt
ttcatggccggcgaggctaatgtggacttcattaaggatcatcaggaactgttcaaattc
aagccgcgcctggaccgggccaccaaggtactcagcttcctgggcgacgtcattgtgaac
ggccaccccgatgtgcgcggcctggtagatgccaggcgcgagctgcgcaagccgcgcctg
cccgaggtgaacctggctaccggctggagcatggccctcgatgcccattctcccggagca
cctgccggcaatgggcaggcagtttcgcgcacggccccctatccgcccggcaccaagcaa
aagctcacggagctggggcccgaaggcttctcaaaatggctgcgcgaagaccccaaaatc
cactacaccgatactaccctgcgcgatgcgcaccagagcctgctggccacgcgcatgcgc
accttcgatatgctgaaggtggctgaaagctacgcccgtatgcacccccagacgttttcc
ttggaatgctggggcggcgctacgtttgatgtggccctgcgctttttgcacgaagacccg
tgggagcggctggccaagctgcgccaggccgtgcccaacattctgctgcaaatgctcatt
cgcggggccaacggcgtgggctacaaagcctaccctgataacctcacggagcgctttgtg
cagcaggccgccgaaaccggcatcgacgtgtttcgcattttcgactccctgaactggatg
ccgggtatggaggcctgcattgggtttgtgcgcaacaaaacggaccgtttggccgaggcc
agcatctgctacaccggcgacattctgaaccccaagcgcaaccgcaagtattccctggaa
tactacctgcgcctggccaaacagattgaggaagccggcgcgcatattctgtgcattaag
gatatggccggcctgctgaaaccctacgcggccaaggagctggttacggcattgcgggac
accgtcagcctgcccattcacctgcacacccacgatacgtcttccctgcaggccgccacc
tacctgaaagcggtggaggccggcgtggatgtgattgacgtggcgctgggaagcctgtcg
ggcctcacctcgcagcccaacttcaactccgtagtggagatgctgcgcgggcagccccgc
caccgcgagttcgagcaacgctccctcaacgaattctccaactactgggaagccgtgcgg
gagcattactacccgtttgagtcggggctgaaagcgggtacctccgaagtgtttcagcac
gaaattccgggtgggcagtactctaacctgcggcctcaagcggcatctttgggcttgctg
gataagtttgaaaccgtgaaaaccacctttgccgatgtcaaccagctattcggcgacatt
gtgaaagtaacgccctcctccaaggtagtaggggatatggctttgttcctggtttccaac
aacctgaccacggccgatgtgctggagaaaggccccagcctaagcttcccggaatcggtg
cgggagctgttccgcggggacattgggcagccggaaggcggctggccgaaagacgtgcaa
aaggctattctgaaagacgagcagcccttcaccgaccgccccaacgagcacctggccccc
atagactttgacgccgagtggcagaagtttgaagagaagtttggtcagcgcggcaagttc
acggatctgctttcctggctgctttaccccaaagtgtttgagcagtactgggcgcacctg
cagcaatacggcgaggtatcggttattcccaccctggtgtttttctacggcctgcagccc
ggcgaggaaaccattattgaaattgcccggggcaagagtatcatcgtaggcctgcaaagc
attggccccgtgaatgaggacggctgccgcaccattttcttctccctcaacggccagacg
cgcaacctggaaatcagagataccagcgtggaggtaaagcgcgtgctgaaccccaaggcc
gataaagccaacccccggcagataggagcgcctttgcaggggctgctttccaaagtgctg
gtaaaggatggcgaagccgtgaagcgcaacgccccgctgttcattattgaagccatgaaa
atggaaaccaccattactgcttcagaagataccacggtgcaggccgtcaatctgcccgaa
ggtaccttggtgcacgccgatgacctggtagtgacgctgagctaa
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