Hydrogenophaga sp. BPS33: F9K07_14195
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Entry
F9K07_14195 CDS
T06379
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F9K07_14195 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_14195 (xseA)
Enzymes [BR:
hyn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F9K07_14195 (xseA)
DNA repair and recombination proteins [BR:
hyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F9K07_14195 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHE88872
UniProt:
A0A6P1J348
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All DBs
Position
3075125..3076408
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AA seq
427 aa
AA seq
DB search
MGDPASARRVWAVGPLMRAVADTLAARFNPVAVRGELSGFSRAASGHCYFSLKDDTGQVR
CALFRRSAEQLTFAPRDGQLVEARGKLDVYGPRGDLQLIVETLQPAGQGALFEQFLKLKA
QLEAEGLFDADRKRALPVQPRSIGVVTSLGAAALRDVVTALRRRVPHIPVVVYPAAVQGG
QAPSELCAALQTAYRRHAETGESEVLLLVRGGGSLEDLWSFNDPNLVRTVAQAPMPVVCG
VGHETDFTLADFVADLRAPTPTAAAELCAPAREQRLGELVYLRERLADGVRSDLDQRGQR
LDRVAQRMGRPSGRVHESQQQLAGLQHRLQGGLVLAAQQHRHRWQVLARALPPSLQRAMD
GQRQRLQRAQAALGLLDPQLVLERGYAFLTDEHGQAVTSTTQTQPGQALQATLADGRIGL
HVDRAAE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatccagcatcggcgcgccgcgtgtgggcggttggtccgctgatgcgagccgtg
gccgacacgctcgcggcgcgcttcaatccggtggcagtgcgcggcgagctttcgggcttc
tcgcgcgcggccagcgggcattgttatttctcgttgaaggacgacaccggccaggtgcgc
tgcgcgttgtttcgccgctctgccgagcagctcacgttcgcgccgcgcgatggccaactg
gtggaggcacgcggcaagctcgacgtctacggcccacgcggtgacctgcaactcatcgtc
gagactttgcagcccgccgggcagggcgccttgttcgagcagttcctcaagctcaaggcg
cagctcgaagccgaaggcctgttcgatgccgatcgcaagcgtgcgctgccggtccagccg
cgcagcatcggcgtggtgacctcgctcggggcggccgccttgcgcgacgtggtcaccgcg
ctcaggcggcgcgtgccgcacattccggtggtggtctacccggcggcggtgcagggcggg
caggcgccatcggagttgtgcgcggccttgcagaccgcctatcgccggcacgccgagacc
ggcgagagcgaggtgctgctgctggtgcgtggcggtggttcgctggaagacctgtggtcg
ttcaacgacccgaacctggttcgcaccgtcgcgcaagcgcccatgcccgtggtctgcggc
gtggggcacgagaccgacttcaccctggccgacttcgtggccgatctgcgcgcgcccacg
cccaccgcggcggccgagctgtgcgcgccggcgcgcgagcagcgactgggcgaactggtc
tacctgcgcgagcggttggccgatggcgtgcgcagcgatctcgaccagcgcggccagcgt
ctggaccgcgtggcccagcgcatgggacggccctcgggccgtgtgcacgaaagccagcag
cagctcgccggcttgcagcaccgcctgcaaggcgggctggtcctggcggcgcagcagcat
cgccaccgctggcaagtgctggcacgcgccttgccaccgtcgctgcagcgcgcgatggat
gggcagcggcaacgcctgcagcgcgcgcaagccgcgttgggcctgctcgacccgcaactc
gtgctggaacgcggctacgccttcctcaccgacgaacacgggcaggccgtgaccagcacc
acgcagacccaacccggccaggccttgcaggccacgctggccgatggccgcatcggtctg
cacgtggacagggcggccgagtaa
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