Idiomarina abyssalis: K5X84_10645
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Entry
K5X84_10645 CDS
T07548
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
iab
Idiomarina abyssalis
Pathway
iab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5X84_10645 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iab03019
]
K5X84_10645 (pcnB)
Enzymes [BR:
iab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K5X84_10645 (pcnB)
Messenger RNA biogenesis [BR:
iab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K5X84_10645 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QZN92181
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All DBs
Position
2212758..2214077
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AA seq
439 aa
AA seq
DB search
MSRDKHPVSRNDISKNAIKVLYRLHNSGFEAYLVGGCIRDILLGLEPKDFDVTTNATPEQ
IKSLFRNCRLIGRRFRLAHVVFGREVIEVATFRGHHGDSPQEENKKNRTADQDEHGQLVR
DNVYGTIEEDAERRDFTANALYYNIADFAIYDFANGVSDINAGILRMIGDPEVRYREDPV
RMLRAVRFATKLNMQMDNSVSGPLKELAPLLINIPPARLFDEFLKMFMSGKAEANFLMMV
EFGLFQQLFPMLKDYLADEQAAPYQMMLKAFRDTDKRIAEEQRVTPAYLIAVLLWWPLQA
RREQLENEGGLPPMDALNVAAADVIHRQSQRVSLPKRFSLPARDIWQLQRRLNVTKGVRA
MKVLEHKRFRAAYDFLLLRSFAESGDKKLSELAAHWSKAQDNPAQLKASKPGPGSGRRKP
RRRRGPRRKPQENKGNDAT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atctccagggataaacaccccgtatctcgtaacgatatcagtaagaacgccataaaggtt
ctttaccgcctgcacaacagcggttttgaagcctatcttgttggcggctgtatccgcgac
attctgctcggcctggagccaaaagattttgacgttaccactaatgccacacctgagcag
ataaagtctttgtttcgcaactgtcgcttaattgggcgtcggtttcgtctggctcatgtg
gtgttcgggcgtgaggtcatagaagttgcaacttttcgcggccatcatggcgacagcccc
caggaagaaaataaaaagaaccggacagcagatcaagatgagcacggtcagttggtgcgc
gacaacgtttacggcactatagaagaagacgcggaacgtcgtgattttactgccaacgcg
ctctattacaatattgccgatttcgcaatttacgattttgctaacggcgttagtgacatt
aatgccggtatattacgcatgattggcgacccggaagtacgttaccgggaagacccggta
cgaatgcttcgtgcggtgcgctttgccaccaagctcaatatgcagatggataactcggtc
agcggtccgctaaaagagcttgcccccttgttgattaacattcctccggctcgtttattt
gacgaatttctgaagatgttcatgtcgggtaaggcggaagcaaactttcttatgatggta
gagtttggcctgttccaacagctcttcccaatgctgaaagattacttagccgatgagcag
gccgcaccttaccaaatgatgctgaaagcttttagagacaccgacaagcgtattgccgaa
gagcaacgcgtaacgcccgcatatttaattgcggtgctcttatggtggccgctgcaggct
cgtcgtgaacaacttgaaaacgaaggcggtctgccgccaatggatgccctcaatgttgca
gcggctgacgttattcacagacagtcacagcgcgtatcactgcctaagcgttttagcctg
ccagcgcgagatatctggcagttacagcgccggctgaatgtaactaaaggcgttcgtgcc
atgaaggtgctggagcacaagcgcttccgtgctgcttacgactttcttttactgcgttca
tttgccgaaagcggtgacaaaaaactgtctgaacttgcggcccactggagcaaagcacag
gacaacccggctcaactaaaagcttcaaagccaggccccggaagcggccgccgcaaacca
cgcagacgccgtggaccgcgccgtaaacctcaggaaaataaaggcaatgacgccacataa
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