Intrasporangium calvum: Intca_1196
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Entry
Intca_1196 CDS
T01385
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ica
Intrasporangium calvum
Pathway
ica03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Intca_1196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_1196
Enzymes [BR:
ica01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Intca_1196
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Intca_1196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADU47714
UniProt:
E6SEV7
LinkDB
All DBs
Position
1332015..1332899
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AA seq
294 aa
AA seq
DB search
MTSQCDQRLCRRDPQALSATSHPTGRMAVMRVITANVNGIRAAIRRGAAPWISQAAPDVL
CLQEVRAGETELAKALAEAGLGHWHVAHTEGTVKGRAGVAVATREPHTAVRVGVEGAFAE
AGRWVEVDVSTPAGVVTVASTYVHTGEAGTGRQVEKQLFLDAMTGRLERAAQAGALMVVT
GDLNVAHREDDLKNWKGNLRKSGFLPEERDYFDRWFDELAWVDVHRVLHGPGPGPYTWWS
WRGKAFDNDAGWRIDYQLASASLAPLARSASVGRAESYAARWSDHAPVIVDYDL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagccagtgtgaccagcggctctgccggcgtgacccgcaggccctgtccgcaacg
tcgcacccgaccggcagaatggccgtcatgcgcgtcatcaccgccaacgtcaacggcatc
cgggcggcgatacgtcgcggcgcggccccgtggatctcccaagcggcaccggacgtcctg
tgcctccaggaggtccgggccggcgagacggagctcgccaaggcgctggccgaggcgggg
ctcgggcactggcacgtcgctcacaccgagggcacggtgaagggccgcgccggggtggct
gtcgcgacccgggagccccacacagcggtgcgcgtcggggtcgagggcgcgttcgccgag
gcgggccggtgggtcgaggtggatgtctcgacgcctgcgggggtcgtgacggtcgcttcg
acatacgtccacactggtgaggcggggaccggtcgtcaggtcgagaagcagctgttcctc
gatgcgatgaccggccgcctggagcgcgccgcccaggccggtgcgctgatggtcgtcacc
ggcgacctcaacgtcgcgcaccgcgaggacgacctcaagaactggaagggcaacttgagg
aagtcaggcttcctgccggaggagcgcgactacttcgaccggtggttcgacgagctggcc
tgggtcgacgtccatcgcgtcctgcacggcccgggtcccgggccctacacctggtggtcc
tggcgtgggaaggcgttcgacaacgacgcgggctggcgcatcgactaccagctcgcgagc
gcctcgttggcccccctcgcccggtccgcaagcgtgggccgggccgagagctacgccgcc
cggtggagcgaccatgccccggtgatcgtcgactacgacctctga
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