KEGG   Intrasporangium calvum: Intca_2329
Entry
Intca_2329        CDS       T01385                                 
Name
(GenBank) bacterial nucleoid protein Hbs
  KO
K03530  DNA-binding protein HU-beta
Organism
ica  Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:ica00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ica03032]
    Intca_2329
   03036 Chromosome and associated proteins [BR:ica03036]
    Intca_2329
   03400 DNA repair and recombination proteins [BR:ica03400]
    Intca_2329
DNA replication proteins [BR:ica03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Intca_2329
Chromosome and associated proteins [BR:ica03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Intca_2329
DNA repair and recombination proteins [BR:ica03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Intca_2329
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG Saf4_Yju2
Other DBs
NCBI-ProteinID: ADU48838
UniProt: E6SFQ9
LinkDB
Position
complement(2598833..2599519)
AA seq 228 aa
MNKAELIGALEARLGSRRVASDALEAVLDIVIREVAKGGKVGITGFGTFERANRAARTGR
NPKTGDTVKIKKTRIPKFRAGTNFKDIVSGQKKLAKTGSAATRASAGTASAAVAAAAGAA
AKKTTAKKAVPAKAATKKATPAKATAKKATPARAATKKATPAKAATRSTATPTTARKTTS
RSTAAKSAPAKKAVTAKKATPAKTTAKTTAKTTAKTATKRTATRKTTG
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgaacaaggcagagctgatcggagcccttgaggcgaggcttggcagccgcagggttgcc
tccgacgccctcgaggctgttctcgacatcgtcattcgtgaggtggccaagggcggcaag
gtgggcatcacgggcttcggcacgttcgagcgggcgaaccgcgcggcgcgaacgggtcgc
aaccccaagaccggtgacacggtcaagatcaagaagacgcgcatcccgaagttccgggcc
ggcaccaacttcaaggacatcgtctcgggccagaagaagctggccaagacggggtccgcg
gcgacccgagcctcggcgggcacggcgtcggctgcggtggcagccgcagcgggggccgca
gcgaagaagacgaccgccaagaaggccgttccggccaaggccgcgacgaagaaggcgacc
ccggccaaggccacggccaagaaggcgaccccggccagggccgcgacgaagaaggccacc
ccggccaaggccgcgacccgttcgacggccacgccgacgacggccaggaagacaaccagc
cggtccacggctgcgaagtccgcaccggccaagaaggccgtcaccgccaagaaggcgacc
ccggccaagaccacagccaagaccacggccaagaccacggccaagaccgccaccaagcgc
accgcaacgcgcaagaccaccggctga

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