Intrasporangium calvum: Intca_2329
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Entry
Intca_2329 CDS
T01385
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_2329
03036 Chromosome and associated proteins [BR:
ica03036
]
Intca_2329
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_2329
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Intca_2329
Chromosome and associated proteins [BR:
ica03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Intca_2329
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Intca_2329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
ADU48838
UniProt:
E6SFQ9
LinkDB
All DBs
Position
complement(2598833..2599519)
Genome browser
AA seq
228 aa
AA seq
DB search
MNKAELIGALEARLGSRRVASDALEAVLDIVIREVAKGGKVGITGFGTFERANRAARTGR
NPKTGDTVKIKKTRIPKFRAGTNFKDIVSGQKKLAKTGSAATRASAGTASAAVAAAAGAA
AKKTTAKKAVPAKAATKKATPAKATAKKATPARAATKKATPAKAATRSTATPTTARKTTS
RSTAAKSAPAKKAVTAKKATPAKTTAKTTAKTTAKTATKRTATRKTTG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcagagctgatcggagcccttgaggcgaggcttggcagccgcagggttgcc
tccgacgccctcgaggctgttctcgacatcgtcattcgtgaggtggccaagggcggcaag
gtgggcatcacgggcttcggcacgttcgagcgggcgaaccgcgcggcgcgaacgggtcgc
aaccccaagaccggtgacacggtcaagatcaagaagacgcgcatcccgaagttccgggcc
ggcaccaacttcaaggacatcgtctcgggccagaagaagctggccaagacggggtccgcg
gcgacccgagcctcggcgggcacggcgtcggctgcggtggcagccgcagcgggggccgca
gcgaagaagacgaccgccaagaaggccgttccggccaaggccgcgacgaagaaggcgacc
ccggccaaggccacggccaagaaggcgaccccggccagggccgcgacgaagaaggccacc
ccggccaaggccgcgacccgttcgacggccacgccgacgacggccaggaagacaaccagc
cggtccacggctgcgaagtccgcaccggccaagaaggccgtcaccgccaagaaggcgacc
ccggccaagaccacagccaagaccacggccaagaccacggccaagaccgccaccaagcgc
accgcaacgcgcaagaccaccggctga
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integrated database retrieval system