Idiomarina sp. X4: CWC33_00285
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Entry
CWC33_00285 CDS
T05226
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CWC33_00285 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
idi01007
]
CWC33_00285 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idi03016
]
CWC33_00285 (lysS)
Enzymes [BR:
idi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CWC33_00285 (lysS)
Amino acid related enzymes [BR:
idi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CWC33_00285 (lysS)
Transfer RNA biogenesis [BR:
idi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CWC33_00285 (lysS)
Prokaryotic type
Other AARSs
CWC33_00285 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ATZ72230
LinkDB
All DBs
Position
complement(45152..46663)
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AA seq
503 aa
AA seq
DB search
MTDKSQAPEVDVNEQIAQRKAKLSALRDKGIAFPNDFRRDSLAADLHADYDNVSKEELAE
KGIRVKVAGRMMTRRIMGKASFATIQDMSGKIQLYVARDNLAEGFYNSEFKKWDLGDIIG
ASGTLFITGTGELSVQVDDVRLLTKALRPLPDKFHGLADQETRYRQRYLDLITNDESRNT
FVVRSQVIEYIRRFLSERQFLEVETPMMQAIPGGASARPFSTHHNALDMELFLRIAPELY
LKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYWGYADYHDLMDLTEQMLRGAAE
AVLGSAQFTSQGVDYDFGKPFERMTVLEAILKYMPEVKEEQLKHMDSAVEIAEQVGVNVQ
SSWGLGKVQIEIFETVAEHRLIQPTFITAYPAEVSPLARRNDEDPFVTDRFEFFAGGREL
ANGFSELNDAEDQAQRFREQVEQKEAGDDEAMFYDEDYVTALEHGMPPTAGEGIGIDRLV
MLLTDSASIRDVLLFPHMRPKAD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaatcgcaagcacccgaagtagatgtaaacgaacagatcgcgcaacgaaag
gcgaaactgtcggcgcttcgcgataagggtatcgcattcccgaacgatttccgtcgggac
tcgctggcagctgatttgcacgcagactacgataatgtcagtaaagaagaactggcagag
aaggggattcgcgttaaggtggccggacgtatgatgacccgccgtattatgggtaaagca
agttttgccactattcaggacatgagcggaaaaattcagctttacgttgctcgtgacaac
ttggcggaaggtttttataacagcgaatttaagaaatgggacttaggcgacattattggt
gcgtcaggtacgctgtttattactggtaccggcgagttgagtgttcaagttgatgacgtt
cgcttgctgaccaaagctttgcgcccgttacctgataagttccatggtttggcggatcag
gaaacgcgctatcgccagcgttatttggacctgattaccaacgatgaatcgcgtaatact
tttgtcgtgcgctctcaggtgattgaatacattcgtcgtttcttaagtgaacgccagttc
ctggaagtagaaacgccaatgatgcaggccattccaggtggtgcgtcggcacgcccattc
agtacacatcataatgcgttggatatggaactgttcctgcgtatcgcgccagagctttac
ttgaagcgcttggtcgttggtggctttgagaaggtgtttgaaattaaccgaaacttccgt
aatgaaggactgtcgacacgccataacccagaattcacaatgctggagttctactggggt
tatgctgactaccatgatcttatggacttaacggaacaaatgcttcgaggtgcagccgaa
gcggttcttggctctgctcagtttaccagccaaggcgtagactacgactttggtaagccg
tttgagcgtatgaccgtactggaagctattttgaagtacatgccggaagtaaaggaagag
caactgaaacacatggatagcgcggtagaaattgctgagcaagtcggtgtgaatgtccag
tcttcatggggtttgggtaaggtacaaatcgaaattttcgaaacggttgctgaacaccgt
ttaattcagccaacctttattacagcttacccggcagaagtatcaccactggcgcgccga
aatgacgaagacccgtttgtgaccgatcgctttgagttctttgctggcggccgtgaatta
gcgaacggtttctctgagcttaatgacgcagaagatcaggctcagcgttttcgggaacag
gttgagcaaaaagaagcaggtgacgatgaagcaatgttctacgacgaagactacgtgacg
gcgttagagcatggtatgccgccaacggccggtgaaggtatcggtattgatcgcttggtt
atgttgttgacggactcagcgtctattcgtgacgtactgctgttcccacacatgcgtccc
aaagcagactaa
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