Idiomarina sp. X4: CWC33_12125
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Entry
CWC33_12125 CDS
T05226
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
idi
Idiomarina sp. X4
Pathway
idi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CWC33_12125 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_12125 (uvrC)
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWC33_12125 (uvrC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH
HHH_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ATZ74398
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Position
complement(2508984..2510819)
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AA seq
611 aa
AA seq
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MTDSNSITFNYKDFLRNLTHQPGVYRMYDESGDVIYVGKAKDLKKRVSSYFREKVDAVKT
QVLVKQIVSMDVTVTDTEADALILENSFIKKYRPRYNVLLRDDKSYPYIILTSHEHPRLG
FHRGARREKGDYFGPFPNGSAVRESLNLMQKLFPIRQCQDSYYRARTRPCLQYQLKRCLA
PCVSKCTDDEYNDQVQLAKHFLNGKNQQVIDELVKKMEQASEALEFEKAARFRDQIAALR
KTQERNSVTGAQQELDVIGMARGNGMTTIQMMFIRDNHLQGSRSYFPKVPADTSDEEVLR
AFLLQFYLSDNAGRKTPREIILPDSVEPDEVLAQVMGQALNRSVKMQNNVRGERKQYQQL
AAKNAVNALESRLNQQSTMNRRTSALQQVLDFGVPIQRMECFDISHTMGQQTVASCVVFD
QNGPKKSDYRRYNITGITPGDDYAAMAKALAKRYDKAREQGNIPDILFIDGGKGQLSQAE
KYFEDWGSDAPMLIGVAKGESRKPGLETLIMAGSHETIALNKDASALHLIQHIRDESHRF
AITGHRQKRAKVQKTSTLEQIEGIGAKRRQTLLKNLGGLQEVKNASISKLSSVPGISQAM
AEKIYYSFRDE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagcaattcaataacctttaattacaaagactttcttcggaacctgactcat
caacccggtgtttaccgtatgtatgatgagtcgggtgacgttatttatgtcggtaaagca
aaagatcttaaaaagcgtgtgtccagttacttccgcgaaaaggtcgatgcagttaaaact
caagtgctggtgaaacaaatagtatcaatggatgttactgttaccgacacggaagctgac
gcgcttattctggaaaacagtttcattaaaaaataccgtccgcgctacaacgttttattg
cgtgacgacaagtcttatccgtatataattttgacctcccatgagcacccaaggttaggg
tttcaccgcggtgcgcggcgcgagaagggcgattacttcgggccttttccgaatggcagt
gcggttcgcgaaagcctgaacttaatgcagaagctgtttcccattcggcaatgtcaggat
tcgtattatcgtgctcggacgagaccatgtctgcagtatcagctcaaacgctgcctggcg
ccttgcgtgagcaagtgtaccgatgacgagtacaacgaccaggttcaattggctaagcac
ttcctcaatggcaagaaccaacaggttattgatgagcttgtaaaaaaaatggaacaggcc
agtgaagcgctggagttcgaaaaagcagctcgttttcgtgaccaaatagcggcacttcgt
aaaactcaggagcgaaactcggttactggcgcccagcaagagcttgacgttattggtatg
gcgcgtggtaacggcatgacaactattcaaatgatgttcattcgggacaatcacttgcag
ggcagtcgcagctactttccgaaagtcccggcggatacgagtgacgaggaagtcttgcgc
gcattcttactgcaattttacctgtctgataacgccggtcgtaaaacaccgagagagatt
attttaccggactcagtagaacctgacgaggtattagcgcaagtgatggggcaggcgcta
aatcgctcggttaaaatgcagaataatgtccggggtgagcgtaaacagtatcagcaactc
gcggctaaaaatgcagtgaatgcgctggaaagccgtctcaaccaacaaagtaccatgaac
cgtcgtacgtcggccctacagcaggtgctggactttggcgtaccgattcagcgtatggag
tgttttgatatcagccataccatgggccagcaaacggttgcttcttgcgtggtgtttgac
caaaacggaccgaagaaatccgactataggcgctacaacattaccggaattacgccaggc
gatgactatgcggctatggcgaaagcattggcgaagcgctatgacaaagcgcgggaacag
ggcaatatacccgacattctctttattgacggtggcaaagggcagctatcccaagctgaa
aagtactttgaagactggggcagtgatgcccccatgcttataggggttgctaaaggcgaa
tctcgcaagccggggcttgaaacgctcattatggcgggcagccacgagaccattgcgctg
aataaagacgccagtgcgttgcatttaattcagcacattcgtgacgagtctcaccgtttt
gcaataaccggacaccgtcagaaacgggcgaaagtgcagaaaacatcgacattggagcaa
atagaaggtattggtgctaaacgtcgacaaacgcttttgaaaaatctgggtggattacaa
gaggtaaaaaacgctagtattagtaaactttctagcgtgcccggcattagtcaggccatg
gcagaaaaaatttattactcgttccgggatgagtaa
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