Ictalurus furcatus (blue catfish): 128605195
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Entry
128605195 CDS
T09387
Symbol
cdh23
Name
(RefSeq) cadherin-23 isoform X1
Organism
ifu
Ictalurus furcatus (blue catfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
RibLong
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
128605195
NCBI-ProteinID:
XP_053476374
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All DBs
Position
3:3189301..3421471
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AA seq
1446 aa
AA seq
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MWSEGSAGRMTVAKLLLSYFLLQALSEAFNQPPRFQNYFFQSYLLIYENTPVGSSITQLT
AVDPDGEPLIFGVVGEEASRFFAVQENTGVVWLRQPLDRETKSEMQVVFSVSDSQGVVKD
TVNIQIGDVNDNAPTFHNQPYTLNIPEDTPVGTSIFMVNATDPDQGTGGSVLFSFQPPSP
FFSIDGARGIVTVSRRLDYEITSAYQLTVNATDQDKLRPLSSLSNMAITLSDIQDMDPIF
TNLPYNTNVEEEAPLGFEVRKIRAIDQDLGKPRGIGYTISSGNTNSVFALDYISGSLTVN
GRLDRENPLYSSGFSLTVKATELNEDRTPSSATVLTTFTILLIDKNDNAPKFNSSEYRVR
ITELAQVGFALPLPIQVEDKDEGVNSMFEVILMGNNSDHFTISPTSVQGRADIRVRVAVP
LDFETIRSYSFSLYANESVAEHVGFARVFIDLLNENDNRPVFSQPLYNISLLESTATGTS
LLRIQATDNDFGTFGVVRYFFSDEPDQFSLDPETGWVTLRGRLDYELSRRYTLTVLARDG
AGEETTGRLRVNVMDVNDNAPVFQKDAYSGSLMENQQVAQQVARARATDEDSPPNNVLTY
SIVYASQFRSFFSITMVEGYAVITVNRPLDYEQVPGGMIYLTLMATDGGDPALNSTVPIT
VELFDENDNPPEFSQSSYIVRISENMVAGATVLFVTATDLDASREFGQASLIYSLQGSSE
FRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITVLDINDNAPMW
QDEPYLANVVEMSPINTDVISVLALDPDNGENGTVVYSISPANPYYIINNRTGKIRTSGA
VLDRESLDPRAAQLMRTIVISATDRGNPPLRSSASTTVYVNLLDLNDNDPTFLNLPFIAE
VPEGLPIDSSVFRVQVQDPDEAENGAVTLVVQMGFPRLDFRLNSSTGVLFSTAVLDRERI
AQYQLRLVASDAGQFPRTSTSTLTITVLDMNDETPTFFPRVYNASVLENVPRDFVVVRLN
CSDNDAGLNAELSYFITGGNQDGKFSVGFRNGVVRTVVDLDRETQASYTLVIEAIDNGPA
GDRKTGTATVYVEVLDVNDNRPIFLQNSYETTVLENVPRGSSVLQVQATDADQGENGRVL
YRIISGNSGGQFSIDLMSGLIARGQRALDRETSSSHLLEVEAYNSDQGSMRSFVRVIVYV
KDVNDERPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVSYALVSGADRKFEV
DVSTGLVTTVDYLDYETKTSYLMNVSATDQAPPFNRAFCTVYVTLLNELDEAVSFLMAGY
EVSLRENIAAGTEVVQVRAQSADNLNQLTYRFDPDTSPAALALFKIDAVTGRITVTGPID
REKGDSYTLTVVADDGGPKRGSTVVNVYNLNFAACSQKVLSQKYTRVTITLSHYFFPPNV
LCICRR
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtgaaggttcggctggcaggatgacagtggccaagctgctgctctcttacttc
ctcctacaagcactcagtgaagcttttaaccaacctccacggttccagaactacttcttc
cagtcatacctgctcatttacgagaacactccagtgggttcttcgataactcaactcaca
gccgtggatcccgatggagagccgctcatttttggcgtggtgggtgaggaggcctcgagg
ttctttgccgttcaggagaacactggcgtggtgtggctccgacagccactcgaccgtgag
acaaagtctgaaatgcaggtggtgttttctgtcagtgacagtcaaggggtggtgaaggac
accgtgaacatccagattggagatgtgaatgacaacgcgccgactttccataaccagcct
tacactctgaatatacccgaggacactccagtgggaacatcaatcttcatggtcaacgct
acagacccggaccaaggcactgggggaagtgtgcttttctctttccaacctccgtctccc
ttcttctccattgacggcgcccgaggaatcgtcaccgtgtcgagacgtctggattatgaa
atcacgagtgcctaccagctcactgtcaatgctacggaccaggacaagcttcgtcctctc
tccagtctgtctaacatggccatcacgctctctgacattcaggacatggaccccattttc
accaacctgccctacaacaccaatgtagaggaggaagccccgctgggttttgaggtgcgt
aagatccgagcgatcgatcaggatctgggcaaacctcgaggcattggatacaccatttca
tcagggaacaccaacagtgtgtttgcgttggactacatcagcggatctttgacggtgaac
ggccgcctggaccgagagaacccgctgtactcttcaggattctcactcacggtcaaggcg
acagagctgaacgaagaccgtacgccctcgtcagcgaccgtcctcaccaccttcaccatc
ctgctcatcgataagaacgataacgctcccaagtttaacagctccgagtaccgggtgcgc
atcaccgagctggcccaagtggggttcgccctgccgctgcctatacaggtggaggacaag
gacgagggagtgaacagcatgttcgaggtgatcttaatggggaacaactcggatcacttc
accatctcccccacgtcggtgcagggccgagctgatatccgcgtgcgtgtggctgtgcct
ctggactttgagactatcagaagctacagcttttctctgtacgccaacgagtccgtggca
gagcatgtgggcttcgctcgggtcttcatcgatctgctcaatgagaatgacaacaggccg
gtgttcagccaaccgctgtataacatcagcttactggagagcacagcaacgggaacatca
ctcctgaggatccaagccacagataatgattttggcacgttcggtgtcgtgcgctacttc
ttcagtgacgagcctgaccaattctcgctggaccccgagaccggctgggtgacgctgagg
ggtcgtctggattacgagctgtcacgtcgctacactctgacggtcttggcccgtgacggc
gctggggaagagaccacaggacgtctccgcgtcaacgtgatggacgtgaatgacaacgct
cctgtctttcagaaggacgcttactccggttcactgatggaaaaccagcaggtcgctcag
caagtggccagagcgagggcgactgacgaagactctcctcctaataacgtcttgacctac
tccatcgtctacgcctctcagttccgcagttttttcagcatcaccatggtggagggctac
gcagtgatcacagtgaacagacctctagactacgaacaggttcctggcgggatgatctat
ctgacactgatggccacagacgggggagatccagccttaaacagcaccgtgcccatcacc
gtagagctgtttgatgagaacgacaatcctccagagttcagccaatcctcgtacattgta
cggatctccgagaacatggtcgcaggggcgactgtgttgtttgtgacagcgacagatttg
gatgcatccagagaatttggccaggcctcactcatctactcactgcagggctcctctgag
ttcagactgaacacacgctcaggggagatcaccactacggctctgctggatcgtgagctg
aagtctgagtacattctgatcgtgcgagctgtggacggaggggtggggcctctgcagaaa
accggtatcgccacggtcaacatcactgtcctggatattaacgacaacgcccccatgtgg
caggacgagccatatctagccaacgtcgtggaaatgagcccaatcaacaccgatgtcatc
tcggtgctggccctggaccctgataatggagagaatgggacagtcgtgtacagtatcagt
ccagcaaacccctattatatcatcaataacagaaccgggaagatccggaccagcggcgcc
gtgctggacagagagagtctggatccccgagctgcccagctcatgaggaccatcgtcatc
tcagccactgatcgtgggaacccaccactgcgctcctcagccagcaccacagtctacgtc
aatctgctggaccttaatgacaacgaccccaccttcctcaacctgccattcatcgccgag
gtgccagagggtcttcctatcgactcgtctgtcttcagggtgcaggtacaggacccggat
gaggcggagaatggggcagtgacattggtggtacagatgggctttccccggctagacttc
cgcctcaacagcagcacaggggtgctgttctccacagctgtactggaccgtgagcggatc
gcgcagtaccagctgcggctagtggcgtccgatgcagggcaattcccacgcacctccacc
agcacccttaccatcacggtgttggacatgaatgacgagacgcctacgtttttcccacgt
gtgtacaacgcgtcggtgttggagaacgtcccgcgggatttcgtggtcgtgcggctcaac
tgttctgataacgacgctggactcaatgctgaactcagctatttcatcacaggtggaaat
caggatgggaaattcagtgtgggcttcaggaacggtgtggtgcgcactgtggtggatctg
gaccgagaaacacaagcgtcatacacactcgtcatcgaggctatcgataacggcccagct
ggggacagaaaaacaggcacagctaccgtctatgtagaagtgctggacgtcaacgacaac
agacccatcttccttcagaacagctacgagacaactgttctggagaacgtcccgagagga
agcagcgtcctacaggtccaggccacagatgcagatcagggagaaaatggcagagttctg
taccgaattatctcaggtaacagtggaggtcagttcagtatagaccttatgtctggtctg
atcgcccgaggacagcgggctctggacagagagacgagcagctctcacctgctggaggtg
gaggcctacaacagtgaccaaggcagcatgcgcagctttgtcagggtgatcgtgtacgtg
aaggacgtgaatgacgagcgtcccgtgttcacccagcagcagtacaacagactcggcctg
agagaaacagccggaatcggcacctctgtgatcgtagtacgggccactgacccagacaca
ggagacggaggcgccgtgtcctacgccctcgtctcgggcgcggaccgtaaatttgaggtg
gacgtcagtacaggactagtgactactgtggattatctcgactatgagaccaagaccagc
tacctaatgaatgtgtcggccacagaccaagctcctccctttaatcgggccttctgcacg
gtatacgtcactctgctgaacgagctggacgaggccgtgtccttcctgatggccgggtat
gaagtgtccctgagggaaaatatagctgccggaacggaagtggtccaagtgcgagctcag
tcagcagataatctgaatcagctgacgtatcgcttcgaccccgatacgtcgcccgctgcc
ctcgcgctcttcaagatcgatgccgtcacgggtcgaatcaccgtgactggtccgatagac
cgagagaagggtgactcctacaccctcacagtggttgctgatgacggagggcctaaaaga
ggatccactgtggtaaacgtctataatctgaatttcgcagcgtgttctcagaaggtgttg
tctcaaaaatatacacgtgtaaccataacgctttctcattatttttttccccccaacgta
ttgtgcatttgtagaaggtaa
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