KEGG   Ictalurus furcatus (blue catfish): 128605586
Entry
128605586         CDS       T09387                                 
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ifu00536]
    128605586 (col13a1)
Glycosaminoglycan binding proteins [BR:ifu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128605586 (col13a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 128605586
NCBI-ProteinID: XP_053477168
LinkDB
Position
3:17678483..17728312
AA seq 524 aa
MGIPGRMGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGQNGQKGDMGPPGPK
GLPGEQGPKGEKGVCGDYTHRKRRIVHPCAGGQATQGEPGAQGPPGPPGPPGPPGNPGLT
GANGPPGKPGEPGKPGKDLRMLTGLKGEPGVPGQKGDHGETGLTGPEGPKGSKGDQGQKG
EKGELSSSGVGVKGEPGVPGLPGSKGQKGDQGIKGETGPEGQPGPRGPPGATGEPGKMLI
NNNENDIRNVHLMGPPGLPGPPGLPGTKGEVGLPGLPGLDGEKGPRGKAGEPGPIGPPGP
EGPRGEGGVMGFPGPKGDKGDMGPSGSPGLDGPTGEKGAAGPTGPIGLPGSMGQKGEAGE
KGENGDQMYGPPGPPGPAGPVGPMGSPGLSGPKGEPGLGVRGDKGSPGQKGDKGDRGHLG
LPGAHGLDGKPGPVGLIGPPGIPGPAGPKGERGEKGEMGVAGPTGPQGIPGLVGPPGLKG
NRGERGKRGNRGAKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNK
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgggcattcctggaagaatgggagctccaggggagccaggtctatctatcattggccca
cgaggacctcctggtcagccgggcactagaggatttcctggctttccgggtcccatcggc
ttggatggcaaacctgggcaaaatggtcagaaaggggatatgggcccaccaggtcccaaa
ggacttcctggtgaacaaggtccaaaaggggaaaagggggtgtgtggtgattatacacat
cggaaacggcgtattgtccacccatgtgctggaggacaggccacacagggtgagcctgga
gcacagggaccaccgggccctcctggtcctccagggcctcctggtaatccaggactgact
ggtgctaatgggccaccgggaaaacctggagaacctggaaaaccaggaaaagacctgagg
atgttgacaggattgaagggagaaccaggtgtaccaggacaaaagggtgatcatggtgag
acaggattaactggacctgaaggccccaagggatccaaaggggatcaaggacagaagggt
gaaaagggggagctgagctcatcaggagttggcgtgaaaggagaaccaggagtgccagga
ctgcctggatccaagggtcaaaaaggtgatcaaggcattaagggtgaaacaggacctgag
ggccaacctggaccaagaggtcctccaggtgcaacaggagaaccaggaaaaatgttaatc
aacaacaacgagaatgatattcgtaatgtgcacctaatgggcccacctggtctacctggg
cctcctgggttacctggtaccaagggtgaagttggactgcctggccttcctggtcttgat
ggggaaaagggtcctcggggaaaagcaggagagcctggacccattggcccacctggacct
gaagggccacgaggagagggaggagttatgggcttccctggacctaaaggggataaagga
gacatgggtccctctgggtcacctggtttagatggccctactggtgaaaaaggggctgca
gggcctactggtcctattggattaccaggatcaatgggtcagaaaggtgaagctggagaa
aagggggaaaatggagaccagatgtatggcccaccaggacctccaggacctgcagggcca
gtggggccaatgggatctccaggattgtcagggccaaagggggagccaggtctgggtgtg
agaggagataaaggatcacctggacagaaaggagataaaggagacaggggtcatcttgga
ttaccaggggctcatggtttagacggcaagcctggtccagtgggtcttataggaccacct
ggtatacctggaccagcaggaccaaaaggagagcggggtgagaaaggagaaatgggagta
gcaggaccaacagggcctcaaggtatccctggcttagtaggaccaccaggattaaaagga
aaccggggggagaggggcaagagaggcaacaggggggccaaaggggataagggagaccaa
ggagccccaggattagatgccccttgtccattgggtgatgatggtctacctgtaccagga
tgttggaataaatga

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