Ictalurus furcatus (blue catfish): 128608241
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Entry
128608241 CDS
T09387
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04810
Regulation of actin cytoskeleton
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128608241 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128608241 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128608241 (itgb4)
04810 Regulation of actin cytoskeleton
128608241 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128608241 (itgb4)
04515 Cell adhesion molecules [BR:
ifu04515
]
128608241 (itgb4)
04090 CD molecules [BR:
ifu04090
]
128608241 (itgb4)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128608241 (itgb4)
Exosomal proteins of bladder cancer cells
128608241 (itgb4)
Cell adhesion molecules [BR:
ifu04515
]
Integrins
Integrin beta subunits
128608241 (itgb4)
CD molecules [BR:
ifu04090
]
Proteins
128608241 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Pur_ac_phosph_N
Integrin_B_tail
Calx-beta
PSI_integrin
I-EGF_1
EGF_2
I-set
SEA
Motif
Other DBs
NCBI-GeneID:
128608241
NCBI-ProteinID:
XP_053481819
LinkDB
All DBs
Position
5:33790101..33818586
Genome browser
AA seq
1917 aa
AA seq
DB search
MGRWAWHLSVVFLSLTLIGHHVISANRCAASKATSCSVCLQTGFGCAYCRDEVFGFDRCD
LLENLKSHSCALIVSVKSSMKMLKKIAIDKNLKHSQVAPQEMSMTLLPGEERVVEMEVFE
PSRGPLDLYILMDFSNSMSDDLDNLKKMGDSLATLVGTLSDDYTIGFGKFVDKVTEPQTD
MRPSKLKEPWTNSDPPFSFQHVITLTSNLNTFKEILQKERISGNLDAPEGGFDAILQAAV
CQSQIGWRQHSTHLLVFSTESAFHYEADGINVLAGILPRNDEACHLDNKGLYTHATQQDY
PSVPTLVRLLVQNNIIPIFAITNHSLSYYEKLVPYFPIAELGVLTDDSSNILNIIKIAFD
NIRSKISIQAENKPRAIGAQMLSAAGVASDYGNFSIQPGEIGKFKLLLNAKTSVNDKPVC
SLNTNERTGTIRVKPTTFSSALEIQTSVLCETCECEKFPEENAARCSGNGKLVCGTCHCY
DKWLGPFCNCSSQVSSDTSGCVEKTGEEPCNGRGDCLCGMCLCYNPNQYEGQFCQFDRSQ
CHRSGGFLCNDRGQCYMGRCVCDSGWTGDACECPLSNATCLDNKGGLCNGHGVCKCGRCE
CEYSGLELGTTCEPNFQAQLGMCEGRRSCVQCQAWKTGEMKGEKCKECLFTIKMVDELKD
RDKVIETCEYRDEEDDCTYYYTVNYPPNPTDKEHEVEVLKKKECPPGGFLWLIPLIMFLM
LLLGLLLLCCWKYCACCKACLARLFACCPCCAMGRMVGFKEDHYMLRQSLLSSDHLDTPL
VRTGPPKSTDVVRWKVKDNVHRGPNHPQNQIQPNPKEIIDFPLSLRLHRPFSDELSRPEG
RNTEILKQEVEENLNNAFRQIPGVHRVQKTRFRTQRNAGKRQNNTIVDTVLSAPRSSYRD
IVNLTDKQVQAGNFSDMKVVPGYYTVATDREATGAVELQEGVESVDVRVPLFIKDEDDDK
KQLLVEAIDVPVGIAGIGKRYVNITVIKEHAKSVLTFLQPSYTFARQDGVANIPISRDII
EDGRTQVTYCTRDLTAKDKKDYISVDGDLMYQPGETQKMVPVKLLELGEGDALLDKQSKQ
FVMDLSNPRQGAKLGKYPRTTINIADKPDPSVIMFKNTTQNFSISDALYNIPVIRTQGLE
NPSTVNWRTISSRFNLSGPVKFAPGDMEKNIVIDPRMQQIPSKPETFQLELYDPSPNSLV
RDRKTTLVNITDSKDVLTKTGSLSFKAPSPTGRIFAPTNINATATGPKKMLLNWNPQSGA
KGYKVKYWIYGDPEAEAQVVDVKSPHAELTNLYPYCDYEMRVCSYNAQGDGDYSDIVPCQ
TLEDVPSEPGRLAFNVIGPTVTQLSWAEPAEPNGVITDYEVVYTPINEDSKPIGPDKKVK
IDNPKKRMLLIENLQQSQTYRYKVRASNKVGWGPYRDATINLATQPHRPMSIPIIPDIPI
VDAEAGDDYDSFLMYSNEVLRSPTSSTRPSVSEFSEDQNINGKWDQGFLFPGGSGSLSRN
ISTSSTSYSVSPRPGGANQSVETSMTYITNKGGSVPRKHDIHTEDVIMRKRSENRTYYDN
DGVRDSIVMSDLTGGFSDILSGSSFSQTTTSYSLNSRVHNHSDDINEALQNLDRVLQDTR
LQRGVPETPSRLVFSALGPTALKVSWQEPHCEKPILKYSVLYQLLNGGEMKRLDITNPAQ
NSVVVQDLMPNQSYLFKVKAESQEGWGPEREGVITIESAVDPKSPLSPVPGSSFTLSTPS
APGPLVFTALSPETLQLSWDKPRKPNGEILGYVVTCEQLHGGGDQRSFQLSGNSATSLTV
SDLSENVPYKFKVQAQTTQGFGPEREGIITIESQDGSMGQYSSQSVMKREMFNLPSQNSS
QTTHTMFTEPFITPEGMMMSSRQVTQHTEMSGSITRQVEMVQRGVTSTVTKKQYYEA
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatgggcgtggcacctcagtgtggtatttctctctctcaccctgattggtcat
catgtcatcagtgccaatcgctgtgcagcgagtaaagccaccagctgttctgtgtgtctg
cagactggattcggctgcgcatactgtcgtgatgaggtctttgggtttgatcgctgtgac
ctgctggagaacctgaaatctcacagctgtgctctgatcgtatcggtgaagagctccatg
aaaatgttgaagaaaattgcgattgataagaacctgaaacactcccaagtggctcctcag
gagatgagtatgactctgttacctggtgaggagcgagtggtggagatggaggtgttcgag
ccatcgcgtggtccactcgacctctacatcctcatggacttctccaactccatgtctgat
gatctggacaacctcaagaagatgggggacagcctagctacgttggttgggactctctct
gatgattacacaattggattcggcaaatttgttgataaagtcactgaaccgcagacagac
atgagaccatcaaagttgaaggagccgtggacgaacagtgaccctccgttctccttccag
cacgtcatcactctcaccagtaacctcaacaccttcaaagagatcctgcagaaggagaga
atatctggcaacctggacgctcccgaggggggattcgacgccatcctgcaggccgccgtg
tgtcagtctcagatcgggtggaggcagcacagcacccatctcctcgtcttctccaccgag
tcggcgtttcattacgaagcggacggcataaacgtgttggcgggaattttgccacggaac
gacgaggcgtgtcacctggacaataagggtctgtacacgcacgccacgcagcaggattac
ccatcagtccccactctggtgcggctgctcgtccagaacaacatcatccccatcttcgcc
atcaccaaccactcgctctcctactacgagaaactggttccgtatttccccatcgcggag
ctcggagtgctgacagacgattcgtccaacatcctcaacatcatcaagatcgccttcgat
aatatccgttcgaagatcagcatccaggctgagaataaacccagagcgatcggtgctcag
atgctctcagcggccggagtcgcgtcagattacggaaacttctccatccagccgggagaa
attggtaaatttaaactgcttctgaacgctaagacgagtgtgaatgataaacccgtgtgc
agcctgaacaccaacgaacgcacggggacgatcagggtcaaacccaccacgtttagctcc
gccctcgagatacaaacctccgtcctctgtgaaacctgcgagtgtgaaaagtttccagaa
gagaatgcggctcggtgtagcggtaacggaaagctggtgtgtggaacctgccactgttat
gataaatggttgggtccgttctgtaactgctcgtctcaggtgtcctcagatacgagcggg
tgtgtggagaagacgggggaggagccatgtaacgggagaggagactgtctgtgtggaatg
tgtctgtgttacaaccccaatcagtacgaaggacagttctgtcagttcgacagatcacag
tgccacagatcaggaggattcctctgtaacgatcgaggccagtgctatatggggaggtgt
gtgtgtgatagtggatggacaggagatgcatgcgagtgtcctctcagtaatgcgacctgt
ctggacaacaaagggggtttgtgtaatggtcatggtgtgtgtaaatgtggacggtgtgag
tgtgaatactccggactagagctgggaacaacatgtgaaccaaacttccaggctcagttg
gggatgtgtgagggcaggaggagttgtgtacagtgccaggcctggaagaccggagagatg
aaaggagagaagtgcaaggaatgtctatttaccatcaagatggtggacgagctgaaggac
agagataaagtgatagagacgtgtgaatatcgtgatgaagaagatgactgcacgtattac
tacacagtgaattatcctcctaatcctactgataaagaacacgaggtggaggtgctcaag
aagaaagagtgtccccctggaggttttctctggttgattcctctcatcatgttcctgatg
ctgttgttgggcctcttactgctctgctgctggaaatactgcgcatgctgcaaggcatgt
ttggctcggctgtttgcctgctgtccgtgctgtgcgatgggtcgtatggtgggatttaaa
gaagatcactacatgctgcgtcagtctttactgagctcggatcacttggacacgccgctg
gttcggaccgggccgcctaagagcacagacgtggtgcgctggaaagtgaaagacaacgtc
caccgtggaccgaaccaccctcagaaccagatccaacccaaccccaaagaaatcatcgac
ttcccgctctcactgcggctccacagaccgttttctgacgaactttcacgtccagaaggt
cgcaacactgaaatcctcaaacaggaagtggaggaaaatctgaataacgcattcagacaa
attcccggtgttcaccgcgtgcagaaaaccagattcaggacacagagaaatgcaggaaag
aggcagaacaacacaatcgtggacacggttctctcggctcctcgttccagctaccgcgac
atcgttaacctgacggataaacaggtgcaggctgggaatttcagcgatatgaaagtagtg
ccgggttactacacagtggccacggacagagaggcgacgggggctgtggagctgcaggag
ggcgtggagtctgtggatgttcgggttccgctcttcatcaaagatgaggatgatgataag
aaacagctgctggtggaggccatcgacgttccggtgggaatcgcaggcatcggaaaacgc
tacgtcaacatcacagtgattaaagaacacgctaagagcgttctgaccttccttcagccc
tcgtacacttttgctcggcaagatggcgtagctaacatcccgattagccgtgacatcatt
gaggacggtcgcactcaggtcacctactgcaccagagacctcaccgccaaggacaagaag
gactacatctcagtagacggagatctgatgtaccagcctggagaaactcagaagatggtt
cctgtgaagctgctggagctcggggaaggagacgccctgttggataaacagtccaaacag
tttgtgatggatctgagcaacccacgtcagggcgctaaactcggcaaatacccgcgaacc
accatcaacatcgccgacaaaccagatccgagcgtgatcatgttcaagaacaccacgcag
aacttcagcatatccgatgccctctacaacatccctgtgatccgcactcagggtctggaa
aacccctccaccgttaactggcgcacaatctcctcccgcttcaacctgtccggcccggtc
aagttcgccccaggagatatggagaagaacatcgtgatcgaccctcgtatgcagcagatt
ccctccaaaccagaaaccttccagctggagctgtatgacccgagccctaatagcctcgtc
cgagacaggaagaccacgctggtcaacatcactgattccaaagatgtcttgaccaagaca
ggatctctttcatttaaagccccgtctcccactggacggatctttgctccgactaacatc
aatgctacagctacaggccctaaaaagatgctccttaactggaaccctcagtctggagcc
aaaggatataaggtgaagtattggatctacggagaccctgaagccgaagcccaggtggtg
gacgttaaaagccctcatgctgaattgacgaatctctacccgtactgcgattacgagatg
cgtgtgtgttcatataatgctcagggagacggggactacagtgacatcgtgccgtgccag
actcttgaagatgtcccaagtgaaccaggccgcctggccttcaatgtcattggcccaact
gtcacgcaactgagctgggcagaaccagcagagcccaatggtgtgatcacagattatgag
gttgtctacacacccatcaatgaggacagcaaacccattggacctgataagaaggtgaag
attgacaaccccaagaagcgcatgttgcttattgagaacctgcagcagtcccagacatac
cgctacaaagtgcgtgctagcaacaaggtgggatgggggccatacagagatgccaccatc
aatctggcaacccaacctcacagacccatgtccattcccattattcctgatattcctatt
gtggatgcagaggcgggggatgattatgacagttttctcatgtacagtaatgaagttctt
cgttcacccacctccagcaccagacccagcgtgtcagagttctccgaagaccagaacata
aacggaaagtgggatcaagggttcctgttcccaggtggaagtggttccctgtcacgcaac
atcagcacttcttcaactagctacagcgtctcaccccgccctggtggtgccaaccagtca
gtggagaccagtatgacttacataaccaacaaaggaggatctgtgcctcgcaagcatgac
atccacacagaggacgtcatcatgagaaaacgatccgaaaacaggacttattatgataat
gatggtgtaagagactccatcgtgatgagcgacttgactggaggattctctgacattcta
agcggttctagcttcagccagactacaaccagctacagcctgaactcccgcgttcacaat
cactcagacgacatcaacgaagctctgcagaacctggacagggttctccaggatactcgg
ctgcaacgtggagtccctgaaaccccaagcaggctggtgttttcagctctgggtcccacg
gcactgaaggtcagctggcaggagccccactgtgaaaagccaatattaaaatactctgtc
ctctaccagcttctcaatggaggtgaaatgaagcgcttggacatcactaaccctgcgcag
aactctgtggtggttcaggacttaatgcccaaccagtcgtacctgttcaaggtaaaagct
gagagtcaggagggttggggtccagagagagaaggagtcatcaccattgagtctgctgtc
gaccccaagagccccctcagccctgtgccagggtcttcattcactctgagcacacccagt
gctccaggtccgctggtgttcactgcattaagtccagagactctccagctcagctgggat
aaaccacgaaaacccaacggcgagatcctgggctacgtggtcacctgtgaacagctgcac
ggtggaggagatcagcgctccttccagctcagcgggaactcggccacgtctctgaccgtt
tctgatctgagtgaaaatgtaccgtataaatttaaagtacaggctcagaccacgcagggc
tttgggccggagagagaggggatcatcactatcgagtctcaggatggttctatgggtcag
tacagcagtcagtctgtgatgaagagagaaatgtttaatttgccatcacagaactcgtca
cagacaacacacaccatgttcaccgaaccctttatcacaccagaaggtatgatgatgtcg
agcagacaggtcacacagcacacggagatgagcggtagcatcacgcggcaggtggagatg
gtgcagagaggagtgacgtccaccgtcaccaagaaacaatattatgaagcctga
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integrated database retrieval system
