Ictalurus furcatus (blue catfish): 128614957
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Entry
128614957 CDS
T09387
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04136
Autophagy - other
ifu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128614957 (atg4c)
04136 Autophagy - other
128614957 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128614957 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128614957 (atg4c)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128614957 (atg4c)
Peptidases and inhibitors [BR:
ifu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
128614957 (atg4c)
Membrane trafficking [BR:
ifu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128614957 (atg4c)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128614957 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
128614957
NCBI-ProteinID:
XP_053492679
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All DBs
Position
11:8560144..8574368
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AA seq
460 aa
AA seq
DB search
MEIKGNDEVEKIKSKFISAWNNVKYSWMLKTKTSFSRNSAVFLLGKCYHFKADDEDSPTE
SCSTDVFDDEPVMGNVDGFRRDFASRIWLTYRDDFATLPESNITTDCGWGCTLRAGQMML
AQALLLHFLGRDWTWPDALTLEPLDTETWTSTTARKLVASIEASFQGDRLRVPEPLCQPQ
CGAEEADAHLKEVYHRTIVSWFGDSLSAQLGVHRLVRLGMTSGKRAGDWYGPGVVAHILR
KAVEIATDPELRGVTVYVAQDCTVYNADVIESHSVQVDTHAAPEGALTDNRAVIILIPVR
LGGEKINPEYFNFVKAILSLEYCIGIIGGKPKQAYYFVGFQDDSMIYMDPHYCQSFVDVS
TSNFPLQSYHCPSPKKMPFIKMDPSCTIGFYSKSVQDYERISSELAKVLQPSSKEKYPAF
TFMKGHGRDYELSVPLEKREWPFIKDTRIPGATAGDFVLL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagattaaagggaacgacgaggtggagaaaataaagtctaagttcatttcggcatgg
aataatgtcaaatacagttggatgctgaaaacaaagacttcctttagtcgcaattctgca
gtcttcctgctggggaaatgttatcacttcaaggcagatgatgaagacagtcctacagaa
agctgcagcacagacgtatttgatgacgaacctgtcatgggcaatgtggatggatttcgg
agggattttgcttcacggatctggctcacttatcgggatgatttcgccacgctgccggaa
tcgaacatcaccacagactgtggctggggctgcactctcagagccgggcagatgatgctg
gcccaggcacttttactgcatttcttgggtagagactggacctggcctgatgcactgacc
ttggagcctctggacactgagacatggacgagcaccacagcacgaaaacttgtcgcctca
atagaagcttcattccagggagaccggctgagagtcccagagcctttatgccagccccag
tgtggggcagaagaagccgacgcccacctgaaagaggtgtaccaccgcactatcgtgtcc
tggtttggagacagtctgtctgcccagctcggggtccaccggctggttcgtctgggtatg
acctcagggaaaagagcaggagattggtatggccctggagtagtggcacacatactcagg
aaagctgtggaaattgctacagatccagaactgcgaggtgtgactgtttatgtggcgcag
gactgcacagtgtacaacgctgatgttatcgagagtcactcagtgcaggtggacacacac
gcggcccctgagggagcgctcactgacaacagagccgtcatcattctcatccctgtcaga
ctggggggagagaagattaaccctgaatacttcaattttgtcaaggctatcctgagcttg
gagtactgtatcggaatcattggagggaaacccaaacaagcctactacttcgttggattt
caagatgacagcatgatttacatggaccctcattactgtcagtcttttgtggatgtcagc
acaagcaattttcctctgcagtcatatcattgcccatcaccaaagaagatgcctttcatt
aaaatggacccaagctgcactattgggttctactccaaaagtgttcaggattatgaaaga
attagcagcgaactggcaaaggtgctgcagccgtcatcgaaagagaagtacccggcgttt
acctttatgaaaggacacgggagagattacgaactgtctgttcctttggagaagagagag
tggcccttcatcaaagacacacgcattcccggggccacggcaggggactttgtgctgctg
taa
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