Ictalurus furcatus (blue catfish): 128622450
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Entry
128622450 CDS
T09387
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128622450 (tsen54)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
128622450 (tsen54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
128622450
NCBI-ProteinID:
XP_053504951
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Position
2:13613376..13647193
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AA seq
496 aa
AA seq
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MAASDIQPEPVQIDFTKELLSSSELFQRRSRSHKIPVRGQKEFLPNYSVQQKACLQKTLD
EHWMLMTEERLERAGNLVNAEWIPEEKIVKLQSPAGKFWQTMGFSDQGKQCLFPEEALYL
MECGSLQVFYQDLPLSIQEGYETFLSAETVTFLQYQVFGHLKRLGYVVNRFDARPSKQLK
RKWSRSPSFRLCTKKSTASPEVSAGQHKGEIKTSVPYSNLETPGQLQRQQTFQDDALKSD
PESDKAPERNWWTNVSSQLQPDSLQTSEHYWDFSCIFFPDLGSYSGNRACLPPPDPSLLP
GALQVSECHLAHWHRNIHLKEECWSKQKRQRDQERHRCSINDDQEVCRCRNWVEYLELLE
KRRSQQHNERPTHLGEQEVMPLAQPGKCSSHRELLEQVSIIQSYDLLVGNSRLPGSDHWR
ITFNVYQPDTEFKKSYPGKPYTHLCVCSFDGPVPDLHALKELSFQSGDVSVTFAVVDHGD
ISFYCFKEFKLPTDVY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcgatattcaaccggaacctgttcagatagattttactaaagaattgctg
agttcatcagaactatttcaaagacggagtcgaagtcataagattcctgtgaggggacaa
aaagaatttttgccaaattactctgtgcagcaaaaggcatgtctgcagaagacccttgat
gagcactggatgcttatgacagaggaacgattggaacgagccgggaaccttgtgaatgcg
gaatggatccctgaggaaaagatagtgaaactgcagtctccagcaggaaaattttggcag
acaatgggattttctgatcaaggaaagcagtgcttgtttccagaggaggccctttatctc
atggaatgtggcagtctgcaagtgttctaccaggatcttcctctctccatccaggagggt
tatgaaactttcctttccgctgaaactgtgactttccttcagtaccaggtgtttggtcat
ttaaagagactgggatatgtggtaaatcgatttgatgctagaccaagcaagcagctgaag
aggaaatggagccggagtcccagttttagattgtgtactaagaaaagtactgcatctcca
gaggtatctgcaggacaacataaaggtgaaattaagaccagtgtcccatacagcaacttg
gaaactccaggccaactacaaagacaacaaacctttcaggatgatgcattaaaatctgat
ccagaatcagacaaagctccagagaggaactggtggacaaatgtatcaagccaactccag
cctgattcactccagacttcggagcattactgggatttcagctgcatcttttttccagac
ctggggtcatatagtggcaaccgtgcctgtcttccccctcctgatcccagcttgctccct
ggtgctctgcaggtatctgagtgccacctggctcactggcacagaaatatccatttgaag
gaggaatgttggtccaagcaaaagcggcagagggaccaagaacgacacagatgcagcatt
aatgatgaccaagaggtgtgtcggtgcaggaactgggttgagtatttagaactattggag
aaaaggaggagccagcagcacaacgaaaggcccacacaccttggggaacaggaggttatg
cctcttgctcagcccggaaagtgtagttcacatcgtgagctcctggagcaagtcagcatt
attcagtcttatgatttgctggtaggaaactccaggttacctggctcagaccactggagg
atcactttcaatgtataccagcctgacacagagtttaagaagagttatccaggaaagccc
tatacccacttgtgtgtttgcagtttcgatggtccggtgccagacttgcatgctttgaag
gagctgtccttccaaagtggagatgtgtctgtgacatttgcagtggtggaccatggggac
atttctttctactgcttcaaggagtttaagctgcccactgatgtctactga
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